NAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCAGCTAGTGAAAGACATTATCCCAACAACCAAAGTAGGCGGT
ATTTTGAGAAAGAAGAGCAGATGTGGTTCTCTGGTGCTTGCATGTACACG
CGCGCGCGCGCGCGCGCGCGCGCACACACACACACACACACACACACACA
CACATAACCCTAGACACATACACCAACTGCATGTATGAATACACACACAT
GCAAGTAAAGAAAGGCCAGATCAGGATGCCAGGTTCTTTATCTCTCGCTC
TCCACATTATAGCCCAGTGTAGCTTCTCACTGAACCTCAGATCACCATTT
CAGCCAGACTGGCCAGCCGTCTGCTCTCCAGGTCTGCCGGTATCTGTCTT
TCAGTGATGGGTTTCTGGCTCACACAGCCATGCCTGGCTTTTGCTGTGGG
TGCTAGAGATCAAAACTCCAGTTCTCATGTGTACAAAGTAAGCTCTTATC
CACTGAGCTACCTTCCCATCCCTTCCAGTGCTTTAAATAGTCAAAACCCC
AAACTTTGCACTTTCCATATGAAAAGCTACCTTTTGTTTTGTATCTCTGT
GTACATGTATATGTATATCTGTGTATATTTTCATGCATGCACACATATGC
CTGTGTATATATGTGTGAATGCATGCACATGGATATCTGCATGTACATGC
GTGGGCATGTGTGCCTGTGTGTTCATGACTGCACATGTGTGTTTTTCTGT
GNGGTTGTGGATTAN

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGACCCCCAGCACCAATATAAA
AGCCAGTGGCTGGCAGCCCACCTGTAATCCCAGCACTCAGGGAACAGAGA
CAAATCCTGGGTGTAAACTGTCTGCTGTCTAGCACTAGGTTCAGCAGCAG
ACCCTGTATGGTAAACAATGGGGATAGAAACCAAGGAAGAGCCTCAGCAT
CAACCTTTGGTCCCCAGATAGACATATTTATGTGAGCAAGCATACACATG
CCTGTGCACACACACATACATGCAAGCAAACATTGGAAAGAAACATAAAC
TCAAGCTTTGAAGTTAAACTAGAACCTTAAATGTTCTACTTAGGCATAGT
TGCACAAGCCTGTAATTCCAACACTTCAAAGACTGGAAGAAGAGACTAGA
GTTCAAGGCCAGCTTGAATTAATAATAAGATTCTATCTCAAAAAATATTT
AGAATTTACTATAAAGTATCTAGGCACTATTGCTCAATTCTTCAAAGAAC
AGCAGTCAGAGATGCAGACCATCCATGGCATTCCAACACATCCTACTAGA
TTTCAGCAAAACCCCATCAGGAGTTAGTGAGAAATCAGTAGGGGGATGCT
GCAAAGGACAACACTAACTTTCTATCTAATTCATCACATTTCTACTTCCA
AGTGATACTCTGAATCCTAAAGAGCCACTAGTTTCCCTGGTGAAGTCTTG
ACCTCCATGATTCCATGTACTA

Query= MSMg01no516_h07.g1 MSMg01no516_h07.g1 CHROMAT_FILE:
MSMg01no516_h07.g1 PHD_FILE: MSMg01no516_h07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:11 2005
         (621 letters)



>mm_chr5_141732336_141733356
          Length = 1021

 Score = 1185 bits (613), Expect = 0.0
 Identities = 619/621 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agacccccagcaccaatataaaagccagtggctggcagcccacctgtaatcccagcactc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 agacccccagcaccaatataaaagccagtggctggcagcccacctgtaatcccagcactc 653

                                                                       
Query: 61  agggaacagagacaaatcctgggtgtaaactgtctgctgtctagcactaggttcagcagc 120
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 agggaacagagacagatcctgggtgtaaactgtctgctgtctagcactaggttcagcagc 593

                                                                       
Query: 121 agaccctgtatggtaaacaatggggatagaaaccaaggaagagcctcagcatcaaccttt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 agaccctgtatggtaaacaatggggatagaaaccaaggaagagcctcagcatcaaccttt 533

                                                                       
Query: 181 ggtccccagatagacatatttatgtgagcaagcatacacatgcctgtgcacacacacata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 532 ggtccccagatagacatatttatgtgagcaagcatacacatgcctgtgcgcacacacata 473

                                                                       
Query: 241 catgcaagcaaacattggaaagaaacataaactcaagctttgaagttaaactagaacctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 catgcaagcaaacattggaaagaaacataaactcaagctttgaagttaaactagaacctt 413

                                                                       
Query: 301 aaatgttctacttaggcatagttgcacaagcctgtaattccaacacttcaaagactggaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aaatgttctacttaggcatagttgcacaagcctgtaattccaacacttcaaagactggaa 353

                                                                       
Query: 361 gaagagactagagttcaaggccagcttgaattaataataagattctatctcaaaaaatat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gaagagactagagttcaaggccagcttgaattaataataagattctatctcaaaaaatat 293

                                                                       
Query: 421 ttagaatttactataaagtatctaggcactattgctcaattcttcaaagaacagcagtca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ttagaatttactataaagtatctaggcactattgctcaattcttcaaagaacagcagtca 233

                                                                       
Query: 481 gagatgcagaccatccatggcattccaacacatcctactagatttcagcaaaaccccatc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 gagatgcagaccatccatggcattccaacacatcctactagatttcagcaaaaccccatc 173

                                                                       
Query: 541 aggagttagtgagaaatcagtagggggatgctgcaaaggacaacactaactttctatcta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 aggagttagtgagaaatcagtagggggatgctgcaaaggacaacactaactttctatcta 113

                                
Query: 601 attcatcacatttctacttcc 621
           |||||||||||||||||||||
Sbjct: 112 attcatcacatttctacttcc 92


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space:   617721
Effective search space used:   617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)