CCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACTATGTCTTTTAATGTAGTTAAAGATTGGGCCTTCGAGATGGC
TCAGTGGGTAAAGACGCTGCCAAGTTTGCTGACCTGAGTTCGATCTTCTG
GACCTTGGAAGGAGAGAATGGAACCCTGCAGGTTGTTCCTCTGATTTGTA
CATGCGTGCACACACGTAATTTCAATAAATAACTGATAGCTCTATTTTTC
TTTTGTTTTGAGACAGAGTCTCATTTATCTCATGTTATCCTTCATCAAGT
CTATCTATAGTTGAAGATAACCTTGAACTTCTGATCTTTTCGCCTCCATT
TTGGTTGCCTGTACAGAGCCACATCTGGTTTATGCTGTGGTGGGGATGGA
ACCCAGAGCTTTGTACATAGTAGGCAGACAGTCTTAACACTCAAGTACTC
CCAGCCTTCTTTTTCTTTACTTTTAACTAAAAACTTAATAGAAAAAAACC
CCATAATTTTGTGTATATAGGTGTTTTCCCTGTATGTATGTATGCATGTA
TGTATGTATGTATGAATGTGTGTGTCACAAGCATGCTTGGTGCCCAGGGC
ACTCAGAAGACAGTGTCAGACCCTCTGGAACTGGAGTTAGTTACAGGTGA
TTATGAGCTACTCTGTGAGTGCTGGGAATTTTACCCCAGATCCTCTGGAA
GAGCAGCCAATGCTCTTAACCATTGAGCTACACTAACTTTTATTTACTCT
AAAANTTGGTTTTATTTTATTTGGGTTTCTGGG

ATTGATAGGGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCAGGAGGCAGCCCTGTCTGCCTAGGAAA
AAAAAAAAAAAAACAGCACAAGGGACAGTTGGTGAGATCAGGAAAAGGGC
TAGATTCAGGGATCCTGGAGTAGAGACTTGAAGCTTAGAAAGAGGGAGAG
GCAAGAAGAAATCACACACATGCACATGTACGCACATACACATTACACAT
GCATCATATGCACCATATATATCATATGTATCACATATATCATATACATA
CACACATGCATACACAGATACATACACAAACATATATACATCATATATAT
CATATACATCACATATATCACATACTTCACAGACATCATATGCATGTACA
TGTGCATATTCATATACATATATATTACACGTGCATATGCATATACATCA
TATGTGCACATATGCATACATGTTACATATACATTGCATTGTATATGTGT
ATACATTATACATGTGCATATACGTACACTTATACATATATCTGTGCATG
TGTGTGTACATATATACATATAGGCTTTGCAATCTGACAGCATGGTGTTG
GGATCCTGGCTGAACTCCTTAGGCACCATGTGACTATGGAAGTTACATCT
TTAGAAATTTGCATTCCTCCTTTGTAAATGGGCTGCTAATGGCCCTGACA
CACTCACACAGTTGCTTTGATAGTTAAGTGAGATGATGCATGTAAAATGT
TGGGCACAGAATCCAGTATGTATAACTGCTCAAN

Query= MSMg01no518_n17.g1 MSMg01no518_n17.g1 CHROMAT_FILE:
MSMg01no518_n17.g1 PHD_FILE: MSMg01no518_n17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:24 2005
         (622 letters)



>mm_chr5_134415216_134416236
          Length = 1021

 Score = 1104 bits (571), Expect = 0.0
 Identities = 606/623 (97%), Gaps = 12/623 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggaggcagccctgtctgcctaggaaaaaaaaaaaaaaaacagcacaagggacagttgg 60
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 201 caggaggcagccctgtctgcct-ggaaaaaaaaaaaaaaaacagcacaagggacagtcgg 259

                                                                       
Query: 61  tgagatcaggaaaagggctagattcagggatcctggagtagagacttgaagcttagaaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgagatcaggaaaagggctagattcagggatcctggagtagagacttgaagcttagaaag 319

                                                                       
Query: 121 agggagaggcaagaagaaatcacacacatgcacatgtacgcacatacacattacacatgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agggagaggcaagaagaaatcacacacatgcacatgtacgcacatacacattacacatgc 379

                                                                       
Query: 181 atcatatgcaccatatatatcatatgtatcacatatatcatatacatacacacatgcata 240
           |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 380 atcatatgcaccatatatatcatatgcatcatatatatcatatacatacacacatgcata 439

                                                                       
Query: 241 cacagatacatacacaaacatatatacatcatatatatcatatacatcacatatatcaca 300
           |||||||||||||||||||||||||||||||||||||||||         ||||||||||
Sbjct: 440 cacagatacatacacaaacatatatacatcatatatatcat---------atatatcaca 490

                                                                       
Query: 301 tacttcacagacatcatatgcatgtacatgtgcatattcatatacatatatattacacgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tacttcacagacatcatatgcatgtacatgtgcatattcatatacatatatattacacgt 550

                                                                       
Query: 361 gcatatgcatatacatcatatgtgcacatatgcatacatgttacatatacattgcattgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gcatatgcatatacatcatatgtgcacatatgcatacatgttacatatacattgcattgt 610

                                                                       
Query: 421 atatgtgtatacattatacatgtgcatatacgtacacttatacatatatct-gtgcatgt 479
           || ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 611 atgtgtgtatacattatacatgtgcatatacgtacacttatacatata-cttgtgcatgt 669

                                                                       
Query: 480 gtgtgtacatatatacatataggctttgcaatctgacagcatggtgttgggatcctggct 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gtgtgtacatatatacatataggctttgcaatctgacagcatggtgttgggatcctggct 729

                                                                       
Query: 540 gaactccttaggcaccatgtgactatggaagttacatctttagaaatttgcattcctcct 599
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gaaatccttaggcaccatgtgactatggaagttacatctttagaaatttgcattcctcct 789

                                  
Query: 600 ttgtaaatgggctgctaatggcc 622
           |||||||||||||||||||||||
Sbjct: 790 ttgtaaatgggctgctaatggcc 812


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1021
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1011
Effective search space:   618732
Effective search space used:   618732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)