XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAGAAG
CTTACCTCCAAAAAACTCAACAACCCAATCCCAAAAAAAAAAAAAATGGG
GTATAGAGCTAAACAGAGAATTTACAACAGAGGAATCTCGAATGGCAGAG
AACCACTTAAAGAAATGTTCTAAATCCTTAGTCATCGGGGAAATGAAAAC
CAAAACAACCTGAGATTCCACCTTACAACTATCAGAATGGCTAAGATCAA
ACATTTAGGTGACAGCATATGTCGGTGAGGATGTCGGTAAAGAGGAACAC
TCCTCCACTGCTGGTGAGATTGCAAACTGGTACAACCACTCTAGAAATCA
ATCTGGAAGTTCCTCAGAAAATTGGAAATAGATCTACAAGAAAACCTAGC
TATACCACTCTTGGGTATATACCCAAAAGATACCCCACTATGGCACAGGG
GCATGTGTTCCACTATGTTCCTAGTGGCCTTATCTGTGATAGCCAGAAGC
TGGAAACAACCCAGATGCCCCAATGGAAGAATGGATACAGAAAATGTGGT
TCATTTACACTATTCAGCTATTAAGTATGAGGACATCCTGACTTTTGCAG
GCAAATGGATAGAACTATAAAATATCACCCCGAATGAGTTAACTCAGAAC
CAAAAGGACATGCATGGAATGTGCTCACTAATAAGTGGCTATTAGCCAAA
AAAGTACATAATACCTAGGATGACACCACAGAACTCAAGAAGGTTACAAG
CAGAAGGG

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTGTGCTGAGTCCCGCTCCTTCAGAACAGTACACTGAAA
GTCAGTTATTGCTAGCAAAGCTCCAGTGGTCCCTTTCCCACCTCAAAGAT
GTTTCACACAAAAAGGCTATTGGTTTGGCTTGAAGCCCTCTGAGGAAGTA
GTGTGGAGGTGGAGGCAGGCTGGCATTCAAGGCCTATCCTCTACAAGCCG
CCCTGTGCCTGGTGTCCCCAGGGGCAATTTTCCACCTGTCTCCGTGAGCA
CCAGAGTCTCCCACACATATACGGTGGAGCAGACATTGTTATGTGGTCCC
ACTGGAAGAGGCACCATGCTTTGCTGACCAAAACCCACTGAGCAGTCAAA
AGTCCAGAGGATCAAAGCTCAACTGGCTAGAAGAGCAAGCAGCTTTGGAA
ATACCTATCTATTCAAGGGGTGTGGGAAAAGCTAGGGCAGTGGAGGTTGA
GTAGGGCAACACCTCTGACAAATGGGCAACGGTGACTTGGGCAAAAGCAT
GTAAGTGAACAGCTGATAAGGCCATTGCTACTGCTACCACCTCCTATTAT
CTATGCTTGAGCAGACATTAGGCAGTGGGAACTGAAAAACTGAGGGTTGG
AGGGCACTGTAGACAACACAGGACCCATCTTAGCATTAAAGAGAGGACAC
TCAAACACTTGTCCTATTAGCCTTTCATGTTCTGTGCCAGTAAAAGACTT
TGGAGCATGGGTAGGGTTCTG

Query= MSMg01no519_h22.g1 MSMg01no519_h22.g1 CHROMAT_FILE:
MSMg01no519_h22.g1 PHD_FILE: MSMg01no519_h22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:13 2005
         (583 letters)



>mm_chr5_34694708_34695692
          Length = 985

 Score = 1108 bits (573), Expect = 0.0
 Identities = 582/585 (99%), Gaps = 2/585 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtgctgagtccc-gctccttcagaacagtacactgaaagtcagttattgctagcaaagc 59
           ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 785 tgtgctgagtccctgctccttcagaacattacactgaaagtcagttattgctagcaaagc 726

                                                                       
Query: 60  tccagtggtccctttcccacctcaaagatgtttcacacaaaaaggctattggtttggctt 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tccagtggtccctttcccacctcaaagatgtttcacacaaaaaggctattggtttggctt 666

                                                                       
Query: 120 gaagccctctgaggaagtagtgtggaggtggaggcaggctggcattcaaggcctatcctc 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gaagccctctgaggaagtagtgtggaggtggaggcaggctggcattcaaggcctatcctc 606

                                                                       
Query: 180 tacaagccgccctgtgcctggtgtccccaggggcaattttccacctgtctccgtgagcac 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tacaagccgccctgtgcctggtgtccccaggggcaattttccacctgtctccgtgagcac 546

                                                                       
Query: 240 cagagtctcccacacatatacggtggagcagacattgttatgtggtcccactggaagagg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 cagagtctcccacacatatacggtggagcagacattgttatgtggtcccactggaagagg 486

                                                                       
Query: 300 caccatgctttgctgaccaaaacccactgagcagtcaaaagtccagaggatcaaagctca 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 caccatgctttgctgaccaaaacccactgagcagtcaaaagtccagaggatcaaagctca 426

                                                                       
Query: 360 actggctagaagagcaagcagctttggaaatacctatctattcaaggggtgtgggaaaag 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 actggctagaagagcaagcagctttggaaatacctatctattcaaggggtgtgggaaaag 366

                                                                       
Query: 420 ctagggcagtggaggttgagtagggcaacacctctgacaaatgggcaacggtgacttggg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ctagggcagtggaggttgagtagggcaacacctctgacaaatgggcaacggtgacttggg 306

                                                                       
Query: 480 caaaagcatgtaagtgaacagctgataaggccattgctactgctaccacctcctattat- 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 305 caaaagcatgtaagtgaacagctgataaggccattgctactgctaccacctcctattata 246

                                                        
Query: 539 ctatgcttgagcagacattaggcagtgggaactgaaaaactgagg 583
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ctatgcttgagcagacattaggcagtgggaactgaaaaactgagg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 985
Length adjustment: 10
Effective length of query: 573
Effective length of database: 975
Effective search space:   558675
Effective search space used:   558675
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)