Query= MSMg01no520_c23.b1 MSMg01no520_c23.b1 CHROMAT_FILE:
MSMg01no520_c23.b1 PHD_FILE: MSMg01no520_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:09 2005
(647 letters)
>mm_chr5_145028313_145029354
Length = 1042
Score = 1210 bits (626), Expect = 0.0
Identities = 638/644 (99%), Gaps = 5/644 (0%)
Strand = Plus / Plus
Query: 4 ggaattctaaaagttctaccatcttaaagtctttcccgtgctgttcctctgagatcactc 63
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 204 ggaattctaaaagttctaccatcttaaagtctttcc-gtgctgttcctctgagatcactc 262
Query: 64 tgagcacatggagctaactcagcagcacccagcagagggcagaagaatgtcatctaatgc 123
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 263 tgagcacatggagctaactcagcagcacccagcagaggacagaagaatgtcatctaatgc 322
Query: 124 tctggagccaagccaagctgtctccaagtcctagaaagcttcctagtttctcagtagtct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tctggagccaagccaagctgtctccaagtcctagaaagcttcctagtttctcagtagtct 382
Query: 184 tgggcacttgtagattcaaaggaagtgcctcacatgctagtgtgtgttctgaggctgaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgggcacttgtagattcaaaggaagtgcctcacatgctagtgtgtgttctgaggctgaag 442
Query: 244 cctgggccaggactgccacaggccagcatctcccgaatactggaattcacctgatagata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cctgggccaggactgccacaggccagcatctcccgaatactggaattcacctgatagata 502
Query: 304 cactctctctcagccagaggcaggctggaggcacctgggccgtgacctcagcctctgggt 363
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cactctc----agccagaggcaggctggaggcacctgggccgtgacctcagcctctgggt 558
Query: 364 tgcctggagtcggcacagtcatctagcacaggacttagtgtatactcatcacaagcacaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgcctggagtcggcacagtcatctagcacaggacttagtgtatactcatcacaagcacaa 618
Query: 424 agccactgcctggcttggcacattttaatcaggcttcaagtggtgtgaagtgatttcttc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 agccactgcctggcttggcacattttaatcaggcttcaagtggtgtgaagtgatttcttc 678
Query: 484 ctgcagggcactctgtttctttagcgggcctctggacaagtcacctctgatgtaacttca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ctgcagggcactctgtttctttagcgggcctctggacaagtcacctctgatgtaacttca 738
Query: 544 tttgatagggatcgttaagagccaatttatgatttctttttaaaggacatcaggaggtct 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tttgatagggatcgttaagagccaatttatgatttctttttaaaggacatcaggaggtct 798
Query: 604 ggcctgtcgattgcctgctcaaattgctggcatgattggactgc 647
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ggcctgtcgattgcctgctcaaattgctggcatgattggactgc 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1042
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1032
Effective search space: 657384
Effective search space used: 657384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no520_c23.g1 MSMg01no520_c23.g1 CHROMAT_FILE:
MSMg01no520_c23.g1 PHD_FILE: MSMg01no520_c23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:09 2005
(498 letters)
>mm_chr5_145192805_145193702
Length = 898
Score = 652 bits (337), Expect = 0.0
Identities = 351/361 (97%), Gaps = 10/361 (2%)
Strand = Plus / Minus
Query: 1 aggggtgtaatgggggtggggggtcgggaagtccctagttgtttttctctgtaagcttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aggggtgtaatgggggtggggggtcgggaagtccctagttgtttttctctgtaagcttga 305
Query: 61 cacctggaaccttaatcttaggtacaatctaaacagttgcttctttaaaatggtgaccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cacctggaaccttaatcttaggtacaatctaaacagttgcttctttaaaatggtgaccac 245
Query: 121 ctagctcaagagaaaagacacctttctcatcatacacaaacacgcagaagaaaaagtgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ctagctcaagagaaaagacacctttctcatcatacacaaacacgcagaagaaaaagtgga 185
Query: 181 gagagagtgaagaagatatccaaagttgacctcctggcagcacacacacacacacacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gagagagtgaagaagatatccaaagttgacctcctggcagcacacacacacacacacaca 125
Query: 241 cacacacacac--------gaacaagcacatgcacacacacacacacaca--aatgaaca 290
||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 124 cacacacacacacacacacgaacaagcacatgcacacacacacacacacacaaatgaaca 65
Query: 291 agcacatgcacacacacaaacgaacaagcacatgcacacacacacacacacacacacaca 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 agcacatgcacacacacaaacgaacaagcacatgcacacacacacacacacacacacaca 5
Query: 351 c 351
|
Sbjct: 4 c 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 154
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
