NNAAATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTGGGGAGGAGAGTACATTCTTGTTTTAAGGTAAACCTGCC
TTCTCAGTAATGGTCCCTTAACCAAGTCCCAGGCAGGCCACACTGGAGGA
GGTCAGGGCCTACCTTCTAGATAACTTCTCATAAAATCAGGTGCTTAGAG
TCCAGGTCTTCCAGAGGCTGAAGGTCCTGGCTTGGCCAGAGGCTGAAGCA
TGGTCACCACTGATTAAGATCCAGAACTTTCCAGCACTGCAGATGAATGA
CAACTTGAAAAACAAACAAACAAACAAAACTATAAAGAGTGAAAATTAGA
AGGCGTAACATGTTCCCCTTCTCCCAACCCATCCCTTACCCTGTTACCCC
AACCCCTCCCCTTCCATCCCCCTCCCACTCCCAGTACATCAGCAGGACAT
TGATGTGTAAAATGTTTAGAAGAATAAGACCTTTTTGGCGGGAAATGGAC
AGTTTGGGGCGTAGGGAAGGAAACTTCCAGAAAATAGATTTTTAGAACTC
ACTTTATTATATCTTTTTGGCAAAACAACTAAAACCATCTCCTTAAACTT
TCTATCAATTACTCTAACTTTCTGAAAGTATATTAATCAAATCAGGAATT
CTATAAAGTCACTAGTTCGTCTAAACAGCATTATTTCATGGAAGTCCATC
CTCATGTTGATCTGCAGGAAGTTTGCCCAGTGGGTGGGCTGATGCCCAGG
AATCAATCATAGCA

NTTTACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAA
TGGCAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAA
ATGCAAATCTAAACAACACTGAGATTCCACTTCACTCCAGTCAGAATGGC
TAAGATCAAAAACTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAA
GGGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTGATACAACCACTC
TGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGA
GGATCCCGCAATACCTCTCCTGGGCATATATCCGGAAGATGTCCCAACCG
GTAAGAAGAACACATGCTCCACTATGTTCATAGCAGCCTTGTTTATAATA
GCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACA
GAAAATGTGGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAAA
ATGAATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGTATCATC
CTGAGTGAAGTAACCCAATCGCAAAGGAACTCACACAATATGTACTCACT
GATAAGTGGATATTAGCCCAGAAACTTAGGATACCCAAGATATAAGAATA
CACTTGCCAAACGCATTGAATTTCTGAAGACCGAAGACCAAATGGGGGAC
ACTTTACCCTTT

Query= MSMg01no522_f10.b1 MSMg01no522_f10.b1 CHROMAT_FILE:
MSMg01no522_f10.b1 PHD_FILE: MSMg01no522_f10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:55 2005
         (582 letters)



>mm_chr5_107825638_107826619
          Length = 982

 Score = 1019 bits (527), Expect = 0.0
 Identities = 565/589 (95%), Gaps = 19/589 (3%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctggggaggagagtacattcttgttttaaggtaaacctgccttctcagtaatggt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattctggggaggagagtacattcttgttttaaggtaaacctgccttctcagtaatggt 261

                                                                       
Query: 65  cccttaaccaagtcccaggcaggccacactggaggaggtcagggcctaccttctagataa 124
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ccctttaccaagtcccaggcaggccacactggaggaggtcagggcctaccttctagataa 321

                                                                       
Query: 125 cttctcataaaatcaggtgcttagagtccaggtcttccagaggctgaaggtcctggcttg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cttctcataaaatcaggtgcttagagtccaggtcttccagaggctgaaggtcctggcttg 381

                                                                       
Query: 185 gccagaggctgaagcatggtcaccactgattaagatccagaactttccagcactgcagat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 382 gccagaggctgaagcatggtcaccactgattaagatccagaactttccaccactgcagat 441

                                                                       
Query: 245 gaatgacaacttgaaaaacaaacaaacaaacaaaactataaagagtgaaaattagaaggc 304
           ||||||||||||||||||||||||||        ||||||||||||||||||||||||||
Sbjct: 442 gaatgacaacttgaaaaacaaacaaa--------actataaagagtgaaaattagaaggc 493

                                                                       
Query: 305 gtaacatgttccccttctcccaacccatcccttaccctgttaccccaacccctcc----- 359
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||     
Sbjct: 494 gtaacatgttccccttctcccaacccatcccttaccctgttaccccaacccctccacttc 553

                                                                       
Query: 360 ------ccttccatccccctcccactcccagtacatcagcaggacattgatgtgtaaaat 413
                 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 554 catcccccttccatccccctcccacccccagtacatcagcaggacattgatgtgtaaaat 613

                                                                       
Query: 414 gtttagaagaataagacctttttggcgggaaatggacagtttggggcgtagggaaggaaa 473
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 614 gtttagaagaataagacctttttggcaggaaatggacagtttggggcgtagggaaggaaa 673

                                                                       
Query: 474 cttccagaaaatagatttttagaactcactttattatatctttttggcaaaacaactaaa 533
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 cttccagaaaatagatttttagaactcactttattatatctttttggcaaaacaactaaa 733

                                                            
Query: 534 accatctccttaaactttctatcaattactctaactttctgaaagtata 582
           ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 734 accatctccttaaactttctatcaattactctaacttcctgaaagtata 782


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space:   555984
Effective search space used:   555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)