Query= MSMg01no522_k07.b1 MSMg01no522_k07.b1 CHROMAT_FILE:
MSMg01no522_k07.b1 PHD_FILE: MSMg01no522_k07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:17 2005
(653 letters)
>mm_chr5_98312919_98313971
Length = 1053
Score = 1249 bits (646), Expect = 0.0
Identities = 649/650 (99%)
Strand = Plus / Plus
Query: 4 ggaattccatctgtctttgaaccttatgaatgatcctttcccagtctatgtgtagactcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccatctgtctttgaaccttatgaatgatcctttcccagtctatgtgtagactcc 263
Query: 64 tgactcaccctcttcatttacagctctttgttgtatttttatgacacatcctccagccag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgactcaccctcttcatttacagctctttgttgtatttttatgacacatcctccagccag 323
Query: 124 tgcaacaaatctcaaggaagctattttgccatttaaaggcagaggtttatttacatccct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgcaacaaatctcaaggaagctattttgccatttaaaggcagaggtttatttacatccct 383
Query: 184 cgtggtgcaaacatgctacaggattctgtgaaaatttgaagtggttaccaaagaaacata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cgtggtgcaaacatgctacaggattctgtgaaaatttgaagtggttaccaaagaaacata 443
Query: 244 gccagagcttctgtagtatttttgatgctcttaaaatatcacgtatgggtgtgtgcctgc 303
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 444 gccagagcttctgtagtatttttgatgctcttaaaatatcacgaatgggtgtgtgcctgc 503
Query: 304 atcagaaatgaaatgccttttggggaagtggccataggtcctgttttagaggcagacaca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atcagaaatgaaatgccttttggggaagtggccataggtcctgttttagaggcagacaca 563
Query: 364 gaacaaacgtctacaaagaccatcacaggaagagttaggtgtacttaccagccttctatg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaacaaacgtctacaaagaccatcacaggaagagttaggtgtacttaccagccttctatg 623
Query: 424 tgcacacacagattatacccgtaacatcaaccatgaatcaactgtgaacatgttggatat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgcacacacagattatacccgtaacatcaaccatgaatcaactgtgaacatgttggatat 683
Query: 484 tttacaatggaatagaattccatcttgttactaaccagagcagttgtgtgtccaacccta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tttacaatggaatagaattccatcttgttactaaccagagcagttgtgtgtccaacccta 743
Query: 544 caaagtgtaagctccatgtgaacttaaagaaactgataacagagacacaggtaaaaattt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 caaagtgtaagctccatgtgaacttaaagaaactgataacagagacacaggtaaaaattt 803
Query: 604 tttattcactaatatgtggaggtgtgactttggatccagccagtcagtga 653
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tttattcactaatatgtggaggtgtgactttggatccagccagtcagtga 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_k07.g1 MSMg01no522_k07.g1 CHROMAT_FILE:
MSMg01no522_k07.g1 PHD_FILE: MSMg01no522_k07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:17 2005
(669 letters)
>mm_chr5_98505823_98506891
Length = 1069
Score = 1141 bits (590), Expect = 0.0
Identities = 636/656 (96%), Gaps = 9/656 (1%)
Strand = Plus / Minus
Query: 14 cataggtgaaatagtagaagctccaggctggaaaacctgcaagtctgtgtaccaaacagt 73
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1069 catagctgaaatagtagaagctccaggctggaaaacctgcaagtccgtgtaccaaacagt 1010
Query: 74 tccaccaccaagttcttacaagggcttcctggctgagtctgcatgaactgcagtttctgc 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 tccaccaccaagttcttacaagggcttcctggctgagtctgcatgaactgcagtttctgc 950
Query: 134 ctcctggcttgttggtggctcagatgtctttggtcctagtttcacaagagcatacacaaa 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 ctcctggcttgttggtggctcagatgtctttggtcctagtttcacaagagcatacacaaa 890
Query: 194 gacatattcccattatgtttccctcctcctgagacaaaatcatagagaggagtaagggtg 253
|||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 889 gacatattcccattatgt-------ct--tgagacaaaatcatagagaggagtaagggtg 839
Query: 254 aacataagtggaataggttttgtgcatatttggctttgttctgtttcaaaccctctggtt 313
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 838 aacataagtggaataggttttgcgcatatctggctttgttctgtttcaaaccctctggtt 779
Query: 314 agtgacttcacctttgggctaatgatgactatgttttaaatacgtaaagatgaatacatt 373
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 778 agtgacttcacctttgggctaatgatgactatgttttaaatacataaagatggatacatt 719
Query: 374 cacgttttgcttacttctgaatacactgcaatattgattatatgtctatactcatatttt 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 cacgttttgcttacttctgaatacactgcaatattgattatatgtctatactcatatttt 659
Query: 434 aatttaactgagggtcgccaaatttccctttttcctagtaatacttatcctctggtattc 493
|||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 658 aatttaacagagggtcaccaaatttccctttttcctagtaatacttattctctggtattc 599
Query: 494 tcttctacaccacagaacttaatccatatttatgtcaatttagctggctaatataatagt 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tcttctacaccacagaacttaatccatatttatgtcaatttagctggctaatataatagt 539
Query: 554 agctgggttcagagctcagcataatttttatttaatcatggactttggatttgcaagtta 613
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 agctgggttcagagcccagcataatttttatttaatcatggactttggatttgcaagtta 479
Query: 614 tttgaccacgggggacggcacagtaccactttctatagtcatcttgctttctttgg 669
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 478 tttgaccacgggggacggcacagtaccactttctattgtcatcttgctttctttgg 423
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
