CCCTTTTTTTNNNNNNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCCGCGGATTCTGTGAATATATAGCTCTGAAAGAGTTTGCT
CTTACATGCCACATGCTTTTTCCATATGGAATACATCTGTTTATGCTGAA
ATTTTCTGTTTAGTAGACATGTATATCTGTTGTTTATGTTGAGCCATTAT
TTCCAAATAACAGTTCTTTTCTGTGATTTTAAGATACATTTCCAAAACTT
TTATGGATTCCTGGAAAAAATTTAAATTTAAATTTTTTTTTCCTAAGGGT
TTAACAACCCAAGTTTCAGGGGACCCCCCCTTCCTGGGTCCCCCCAGTCC
CCCAAGGTTTTTTTCCTGGGGCCCCCTCTCCCCCATTTTTACCCCTCTTA
AAAAAAATTTTTTTGGGAAAACCCCCCCTCGTTGTTTTGGCTCCAAAAAA
CCCCCCGGGGGGAATAATTTTTGGCTTCTTCCCCTCCTGTCGGGGGGGGG
GCGCGGAAAAAAAAAAGAGGTGTCCCCCCCCCCTCCTCCCCCGAAAAAAA
AAAAAAAAAAAAAACACCCCCGTCGGGGGGTGTGTTAAAAAAAAAAACCC
CCACCCCCTTCTTTTTTTTTTTTTTTTTAAAAAAAACCCCCCCCCCCNTT
TTTTTTTATTTGATATTGGTGGGGGGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTGCGGTCACTTTTGCCTTTGCAGATGCTGACAGC
TCAGTGCTTTGCAGACATCTCATAGGAGTTGCTGGCTTTCACTCTTCACT
TCCAAGTGCATTTTCCAAGGTCCAGGTAGGCCATGAAGATGGTATCAGCT
CAGGCCAAGCTATGCTTCCAGTCCAGTGAATCCAAGGTCCGTTGTTAGTA
CAATGAAACAGGAATAAAAGTCCGCTGCAGTGCATGGATACGATGCCTGC
CTGTATACTGTGGGCTCTCTTCAAAGGCGTGGTCAAAAAGTCATCACATT
GATAGTTACAAGCAACTTTACTTTCTCCAGCAAAGTTTATGGAGTTAGAA
AGTTATGTAGTCTATTGTGAAATTAATGCCTCAAGTAAAGACTCCCCATG
CCCCACTATCTGTTTTACTTGTTTCTGTTGCACAATGTATGTCACAGTTC
CTACTTATTTGTCATTGTTCCTCCTTTGCTTTATATAGACTTGCTGATGT
TTTTCTACAGGCTGAGTTTTCAAAAACATCCTGGAAGATGAATACTTCTG
TGTCCATTTGTCCTTGGGAAGGAGTCTCTGTTTATTATACTATAATTTTT
CACTAATGCTGGTTGTACACCAGCTGTAAGTAAAGGGCATTCACTCCTTT
TACATGGAGATGGCCN

Query= MSMg01no523_a16.g1 MSMg01no523_a16.g1 CHROMAT_FILE:
MSMg01no523_a16.g1 PHD_FILE: MSMg01no523_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:50 2005
         (594 letters)



>mm_chr5_22619838_22620831
          Length = 994

 Score = 1149 bits (594), Expect = 0.0
 Identities = 594/594 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgcggtcacttttgcctttgcagatgctgacagctcagtgctttgcagacatctcatagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 tgcggtcacttttgcctttgcagatgctgacagctcagtgctttgcagacatctcatagg 735

                                                                       
Query: 61  agttgctggctttcactcttcacttccaagtgcattttccaaggtccaggtaggccatga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 agttgctggctttcactcttcacttccaagtgcattttccaaggtccaggtaggccatga 675

                                                                       
Query: 121 agatggtatcagctcaggccaagctatgcttccagtccagtgaatccaaggtccgttgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 agatggtatcagctcaggccaagctatgcttccagtccagtgaatccaaggtccgttgtt 615

                                                                       
Query: 181 agtacaatgaaacaggaataaaagtccgctgcagtgcatggatacgatgcctgcctgtat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 agtacaatgaaacaggaataaaagtccgctgcagtgcatggatacgatgcctgcctgtat 555

                                                                       
Query: 241 actgtgggctctcttcaaaggcgtggtcaaaaagtcatcacattgatagttacaagcaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 actgtgggctctcttcaaaggcgtggtcaaaaagtcatcacattgatagttacaagcaac 495

                                                                       
Query: 301 tttactttctccagcaaagtttatggagttagaaagttatgtagtctattgtgaaattaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tttactttctccagcaaagtttatggagttagaaagttatgtagtctattgtgaaattaa 435

                                                                       
Query: 361 tgcctcaagtaaagactccccatgccccactatctgttttacttgtttctgttgcacaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tgcctcaagtaaagactccccatgccccactatctgttttacttgtttctgttgcacaat 375

                                                                       
Query: 421 gtatgtcacagttcctacttatttgtcattgttcctcctttgctttatatagacttgctg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gtatgtcacagttcctacttatttgtcattgttcctcctttgctttatatagacttgctg 315

                                                                       
Query: 481 atgtttttctacaggctgagttttcaaaaacatcctggaagatgaatacttctgtgtcca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atgtttttctacaggctgagttttcaaaaacatcctggaagatgaatacttctgtgtcca 255

                                                                 
Query: 541 tttgtccttgggaaggagtctctgtttattatactataatttttcactaatgct 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tttgtccttgggaaggagtctctgtttattatactataatttttcactaatgct 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space:   574656
Effective search space used:   574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)