Query= MSMg01no523_g08.b1 MSMg01no523_g08.b1 CHROMAT_FILE:
MSMg01no523_g08.b1 PHD_FILE: MSMg01no523_g08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:18 2005
(577 letters)
>mm_chr5_49839846_49840821
Length = 976
Score = 1085 bits (561), Expect = 0.0
Identities = 573/577 (99%), Gaps = 2/577 (0%)
Strand = Plus / Minus
Query: 1 cattagctagattgaagaggctataatttttttcaattttattttagtagattaacaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 cattagctagattgaagaggctataatttttttcaattttattttagtagattaacaagg 870
Query: 61 tatggcttcttctcttcagatggattttaaggaccaccttgagatcagttaaaaaaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 tatggcttcttctcttcagatggattttaaggaccaccttgagatcagttaaaaaaacaa 810
Query: 121 acaaacaaaagcaaaaaacaaacaaacaaaaaaaaacaagaaaaagctataattaatgaa 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 809 acaaacaaaagcaaaaaacaaacaaac-aaaaaaaacaagaaaaagctataattaatgaa 751
Query: 181 caatgtgtgtcttcaccatgatggagaaagagtaggtgtctggctatatgttctccaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 caatgtgtgtcttcaccatgatggagaaagagtaggtgtctggctatatgttctccaacc 691
Query: 241 gagatgttctgtgtattgtattatactgtctctaaggacatggtgctatttctttttatc 300
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 690 gagatgttctgtgtattgtattatactgtctctaaggacatggtgatatttcattttatc 631
Query: 301 aagaggaatcctttgaagtgaaagataaactcatatcaggtttaaaaattaccccattct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aagaggaatcctttgaagtgaaagataaactcatatcaggtttaaaaattaccccattct 571
Query: 361 tagaaccctttcaaaatcattgttggatgggttacaaaattaaaacttttaatactctga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 tagaaccctttcaaaatcattgttggatgggttacaaaattaaaacttttaatactctga 511
Query: 421 taattttttggatagtttgtattttttctttttcttttatttcagcattcgttatgcttt 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 taa-tttttggatagtttgtattttttctttttcttttatttcagcattcgttatgcttt 452
Query: 481 gaaaaatgacacctataaaggaatggctaccttctagtgaatagagtttcactaacaata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gaaaaatgacacctataaaggaatggctaccttctagtgaatagagtttcactaacaata 392
Query: 541 tctgaatctgtttatgaatcctaaagttaacaaagct 577
|||||||||||||||||||||||||||||||||||||
Sbjct: 391 tctgaatctgtttatgaatcctaaagttaacaaagct 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 976
Length adjustment: 10
Effective length of query: 567
Effective length of database: 966
Effective search space: 547722
Effective search space used: 547722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_g08.g1 MSMg01no523_g08.g1 CHROMAT_FILE:
MSMg01no523_g08.g1 PHD_FILE: MSMg01no523_g08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:18 2005
(338 letters)
>mm_chr5_49687040_49687778
Length = 739
Score = 601 bits (311), Expect = e-176
Identities = 332/339 (97%), Gaps = 1/339 (0%)
Strand = Plus / Plus
Query: 1 catattcaggtctatctgcagctgacctactcaca-tgcatacctctcagccagtgtagg 59
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 catattcaggtctatctgcagctgacctactcacaatgcatacctctcagccagtgtagg 260
Query: 60 gtggggtgagtactaggcacttgggattgccttcttctcctggaggttggagatgagaag 119
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 261 gtggggtgagtactaggcacttgggattgccttcttctcctggaggttggagctgagaag 320
Query: 120 gtacctcacatctcaactgatagatttctgcttttcaaatgtttgagatgaagtgtaaca 179
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgcctcacatctcaactgatagatttctgcttttcaaatgtttgagatgaagtgtaaca 380
Query: 180 tcgagtcaaagaggaaaaataatggggttgtgacataacagccaaagaagctccatgaca 239
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 381 tcgagtcaaagaggaaaaataatggggttgtgacacaatagccaaagaagctccatgaca 440
Query: 240 agaaaatattaaaggcacctgctttatctctaaaggcaggacacagcatcaaacaaatgt 299
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 agaaaatattaaaggctcctgctttatctctaaaggcaggacacaggatcaaacaaatgt 500
Query: 300 cctgaacttttttaaactgatcttcacattcacatagac 338
|||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctgaacttttttaaactgatcttcacattcacatagac 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 739
Length adjustment: 9
Effective length of query: 329
Effective length of database: 730
Effective search space: 240170
Effective search space used: 240170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
