Query= MSMg01no524_g09.b1 MSMg01no524_g09.b1 CHROMAT_FILE:
MSMg01no524_g09.b1 PHD_FILE: MSMg01no524_g09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:40 2005
(655 letters)
>mm_chr5_87241319_87242373
Length = 1055
Score = 891 bits (461), Expect = 0.0
Identities = 470/473 (99%)
Strand = Plus / Minus
Query: 183 attagaagttcagggctcaagtggtggctcgttagctaaaagaacttgatgttgcaagag 242
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1055 attagaagttcagggctcaagtggtggctcgttagctaaaagaatttgatgttgcaagaa 996
Query: 243 gaccagagctcagttcccagactcacatgggactccagtcccagggcatctgatgccctc 302
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995 gaccagagctcagttctcagactcacatgggactccagtcccagggcatctgatgccctc 936
Query: 303 cttcagacctccagagggatcaggcaggcatggagtgtacagacttgcacataggcaaaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 cttcagacctccagagggatcaggcaggcatggagtgtacagacttgcacataggcaaaa 876
Query: 363 acactactacacataaaatacgtatttaaaaaggaaaaagggagagctgaccagaagtat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 acactactacacataaaatacgtatttaaaaaggaaaaagggagagctgaccagaagtat 816
Query: 423 ttagtgcagatggatatgagtcagaagttcaaactttataaacctacaattagatgggag 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 ttagtgcagatggatatgagtcagaagttcaaactttataaacctacaattagatgggag 756
Query: 483 aacagaacacagaagtacataatattaaacagtatgactttcaaattaatgtacccctgc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 aacagaacacagaagtacataatattaaacagtatgactttcaaattaatgtacccctgc 696
Query: 543 cttggctctgtatactcagcaacaattaaatttcacctaatacagaaaactattcttcta 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 cttggctctgtatactcagcaacaattaaatttcacctaatacagaaaactattcttcta 636
Query: 603 gatgagtacttttatttgtactatagtaataaactaaatatagtcatatcaag 655
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 gatgagtacttttatttgtactatagtaataaactaaatatagtcatatcaag 583
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_g09.g1 MSMg01no524_g09.g1 CHROMAT_FILE:
MSMg01no524_g09.g1 PHD_FILE: MSMg01no524_g09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:40 2005
(628 letters)
>mm_chr5_87084046_87085074
Length = 1029
Score = 1193 bits (617), Expect = 0.0
Identities = 626/629 (99%), Gaps = 1/629 (0%)
Strand = Plus / Plus
Query: 1 tgggaggagagggaagcataatattaaaatgtaaagtgaatacataaatttaaaaaatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggaggagagggaagcataatattaaaatgtaaagtgaatacataaatttaaaaaatag 260
Query: 61 ttacag-aaaaaaatcaagcaatcaaacaaataataaaatcatatcaaaacaaatgaaca 119
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacagaaaaaaaatcaaccaatcaaacaaataataaaatcatatcaaaacaaatgaaca 320
Query: 120 cacaaaaaaatatgaactgctccaacttcttgtcagagctgcttccttatcagatcttct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacaaaaaaatatgaactgctccaacttcttgtcagagctgcttccttatcagatcttct 380
Query: 180 gtgactggtgggagtgggcagggtgggcattgttttgtactttggaggaaggttattaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgactggtgggagtgggcagggtgggcattgttttgtactttggaggaaggttattaac 440
Query: 240 cactttgtgtttagattctttatctgtacaggtaggtcaatagctttctttatggaagga 299
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 cactttgtgtttagattctttatctgtacaggtaggtcaataactttctttatggaagga 500
Query: 300 agagacagaggattcgttgggatagagtctttaggatcaattcttgataacacagcaaga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agagacagaggattcgttgggatagagtctttaggatcaattcttgataacacagcaaga 560
Query: 360 acttaacagttattaaacactattgcttaacttactattatgatgtcaataatcatgtga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acttaacagttattaaacactattgcttaacttactattatgatgtcaataatcatgtga 620
Query: 420 aaataattgtgatgaaatagattaaatatcaagataactaattgggatttagtatgccaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaataattgtgatgaaatagattaaatatcaagataactaattgggatttagtatgccaa 680
Query: 480 agctactttaggagaattggtctttgaacagttggagaaattggaattatgggtgacata 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agctactttaggagaattggtctttgaacagttggagaaattggaattatgggtgacata 740
Query: 540 agagagctaaaattatcacttaaaagtaaatttataacctgggtatggtgacataagccc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agagagctaaaattatcacttaaaagtaaatttataacctgggtatggtgacataagccc 800
Query: 600 acaatctcagcaccaaaaaacaatccccc 628
|||||||||||||||||||||||||||||
Sbjct: 801 acaatctcagcaccaaaaaacaatccccc 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1029
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1019
Effective search space: 629742
Effective search space used: 629742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
