Query= MSMg01no524_p06.b1 MSMg01no524_p06.b1 CHROMAT_FILE:
MSMg01no524_p06.b1 PHD_FILE: MSMg01no524_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:23 2005
(215 letters)
>mm_chr5_150999423_151000037
Length = 615
Score = 373 bits (193), Expect = e-108
Identities = 206/211 (97%), Gaps = 2/211 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtgcatgcccaaggttggattgttgagtgaagctgacaggttttttttttttt 64
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 207 gaattctgtgcatgcccaaggttggattgttgagtgaagctgacagg--ttttttttttt 264
Query: 65 ttttttttttttttatgggcgccagaaatcaacagcagtaagttctctggtgcatgcttc 124
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttttttttttttaatgtgcgccagaaatcaacagcagtaagttctctggtgcatgcttc 324
Query: 125 aaattccaaccctgcatcaaagcctgagaccatttgtagtcgcgggctcaaatcaacatt 184
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaattccaaccctgcatcagagcctgagaccatttgtagtcgcgggctcaaatcaacatt 384
Query: 185 gtggtccgggtgtgggggtggggtggtgatg 215
|||||||||||||||||||||||||||||||
Sbjct: 385 gtggtccgggtgtgggggtggggtggtgatg 415
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 615
Length adjustment: 9
Effective length of query: 206
Effective length of database: 606
Effective search space: 124836
Effective search space used: 124836
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no524_p06.g1 MSMg01no524_p06.g1 CHROMAT_FILE:
MSMg01no524_p06.g1 PHD_FILE: MSMg01no524_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:23 2005
(641 letters)
>mm_chr5_151124509_151125549
Length = 1041
Score = 1193 bits (617), Expect = 0.0
Identities = 632/637 (99%)
Strand = Plus / Minus
Query: 1 aagaagcacattaaatacatcacttcccacttttagcttcttagtgggtcccccaaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 aagaagcacattaaatacatcacttcccacttttagcttcttagtgggtcccccaaattc 600
Query: 61 caactggggcccacacaggctagacttcagaagctaggcaactcaagttataacaatgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 caactggggcccacacaggctagacttcagaagctaggcaactcaagttataacaatgtc 540
Query: 121 tgtggagtcatacccatcgacatgtttaagccagcagaggcatggggctcataggataga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 539 tgtggagtcatacccatcgacatgtttaagccagcagaggcatggggctcatagaataga 480
Query: 181 tactcagactgttgaatgtgtcattcccccggctcaggaccatcctagtaagccttgggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tactcagactgttgaatgtgtcattcccccggctcaggaccatcctagtaagccttgggt 420
Query: 241 atgacagtagtgggtggagcaatgtgtgaggacacaggatgggggacccccagcctcctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 atgacagtagtgggtggagcaatgtgtgaggacacaggatgggggacccccagcctcctg 360
Query: 301 gatagcctgggagcctcttatcctcactaaaatatggttactatggagagggaaagaaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gatagcctgggagcctcttatcctcactaaaatatggttactatggagagggaaagaaat 300
Query: 361 ccagccacagcattgggaagatgcgtggtatagagcattgagtatcatcctcttagtggc 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 299 ccagccacagcattgggaagatgtgtggtatagagcattgagtatcatcctcttagtggc 240
Query: 421 ctgtgagcatggccgtcacagtctttcagaaatttcttagggctggagagatggatcagt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ctgtgagcatggccgtcacagtctttcagaaatttcttagggctggagagatggatcagc 180
Query: 481 ggttaagagcactgactgctcttccagaggccctgagttcaattcccagcaaccacatgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ggttaagagcactgactgctcttccagaggccctgagttcaattcccagcaaccacatgg 120
Query: 541 tggctcacaaccatctgtaacgggatctgacaccctcttctggtgtatctgaagacagct 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tggctcacaaccatctgtaatgggatctgacaccctcttctggtgtatctgaagacagct 60
Query: 601 acaatgcactcataaataaaacaaataaatacttttt 637
||||||||||| |||||||||||||||||||||||||
Sbjct: 59 acaatgcactcttaaataaaacaaataaatacttttt 23
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
