TXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCTGAGGATCCGCGGAATTC
TCAACTATTTCCTACCAAATGGCTGAGAAGCACCTAAAAAACTGTTCAAC
ATCCTTAATCATCATGGAAATGCAAATCAAAACAACCCTGAGATTCTACC
TCACACCAGTCAGAATGGCTAAGATAAAAAACTCAGGTGACAGCACACGC
TGGCGAGGATGTAGAGAAAGAGAAACACTCCTCCATTGTTGGTGGGATTG
TAAGCTGGTACAACCACCCTGGGAATCAGTTTGGTAGTTCCTCAGAAAAT
TGGATGTAGTACTACCAGAATATCGAGCAATACCACTCCTGGGCATATAC
CCAGAAGATGCTCTAACTTGTAGTAAGGACATAAGCTCCACTATGTTCAT
AGCAGTCTTATTTATAATAACCAGAAGCTGGAAAGAACCCAGATGTCCTT
CAACAAAGGAATGGATATAGAAAATGTGGTACATTTACACAATGGATTAC
TACTCAGCAATTAAAAACAATGATTTTATGAAATTCTTAGATAAATGGAT
GAATCTGGAGGATATTATCCTTAGTGAGGTAACTCAATCACAAAAGAAGA
CACATGATATGCACGTATTGATAAGTGGATATTAGCCCAGAAGCTCAGAA
GACCTAAGATACAATTTGCGAATCACCTGAAACTCAAAAAGAAAGAAGAC
CTAAGTGCCAGGTCCGGTGGCGCCCGCCTTTTATCCCAGCAGAGGT

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCTAGAATAGAGTTAGATAATTTTCCATGGGA
TTCTCCATCAAGGAGATTAAATTCAGGTTAAACCTGAAATGTTCTCAGCA
AGAATATAAGATGAAGGAAACTCTGCACTGTCTTGCTTCTTGTATAGAAG
AGGGTGGAGGCTCCCACGGATGCCAAGGGGAAGCTGGAGGAGCTGAGTAA
CATCCTGGCAGTCATGAGGAAGGCTGCTGCCAAGATGGATAGATGGCTCC
ATACCTTTAATAAACATTTATGTTGCACAGGAGAAAACATAATGGAAAAA
AAAAAGAAAAGAAAAAGGAAACTCCATAAAATGTTTGCAAACAGAATTTC
GTATTTTTCAGCAAAAACATCTGGATAACTTGTATCTTTGTTGCTGTTGT
TGATTGACAGGCATATATCCTGGTATCAGACAGTGCATGGTAGAGTACAT
TAGTCATTTGTAATATTCACCTGTTAATGGAGAGTTCATTTCTGAAGTTT
GATACCATAAACCCTGGTGAATCATGATGAACCCTGCTGTTGCAGAGTTT
ACTGTTTAGTCCCATAGGCTAAATAAATGCTGCTACCAAAACCACCACAC
TGTGTTTCTTTCAACAAAACAACAGTTTATTAGAATTTTGCATTGGTTTT
CTGGGCTTCTTTCCTTCATTATTCCAGTACTAATACCCTACAGGCCAGCA
GTGG

Query= MSMg01no525_o03.g1 MSMg01no525_o03.g1 CHROMAT_FILE:
MSMg01no525_o03.g1 PHD_FILE: MSMg01no525_o03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:38 2005
         (625 letters)



>mm_chr5_17891676_17892701
          Length = 1026

 Score = 1172 bits (606), Expect = 0.0
 Identities = 621/626 (99%), Gaps = 1/626 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctagaatagagttagataattttccatgggattctccatcaaggagattaaattcaggtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 ctagaatagagttagataattttccatgggattctccatcaaggagattaaattcaggtt 767

                                                                       
Query: 61  aaacctgaaatgttctcagcaagaatataagatgaaggaaactctgcactgtcttgcttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 aaacctgaaatgttctcagcaagaatataagatgaaggaaactctgcactgtcttgcttc 707

                                                                       
Query: 121 ttgtatagaagagggtggaggctcccacggatgccaaggggaagctggaggagctgagta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 ttgtatagaagagggtggaggctcccacggatgccaaggggaagctggaggagctgagta 647

                                                                       
Query: 181 acatcctggcagtcatgaggaaggctgctgccaagatggatagatggctccataccttta 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 646 acatcctggcagtcatgaggaaggctgctgccaagatggatagatgactccctaccttta 587

                                                                       
Query: 241 ataaacatttatgttgcacaggagaaaacataatgg-aaaaaaaaaagaaaagaaaaagg 299
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 586 ataaacatttatgttgcacaggagaaaacataatggaaaaaaaaaaagaaaagaaaaagg 527

                                                                       
Query: 300 aaactccataaaatgtttgcaaacagaatttcgtatttttcagcaaaaacatctggataa 359
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 526 aaactccataaaatgtttgcaaacagaatttcatatttttcagcaaaaacatctggataa 467

                                                                       
Query: 360 cttgtatctttgttgctgttgttgattgacaggcatatatcctggtatcagacagtgcat 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 cttgtatctttgttgctgttgttgattgacaggcatatatcctggtatcagacagtgcat 407

                                                                       
Query: 420 ggtagagtacattagtcatttgtaatattcacctgttaatggagagttcatttctgaagt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 406 ggtagagtacattagtcatttgtaatattcacctgttaatggagagttcatttctgcagt 347

                                                                       
Query: 480 ttgataccataaaccctggtgaatcatgatgaaccctgctgttgcagagtttactgttta 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttgataccataaaccctggtgaatcatgatgaaccctgctgttgcagagtttactgttta 287

                                                                       
Query: 540 gtcccataggctaaataaatgctgctaccaaaaccaccacactgtgtttctttcaacaaa 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gtcccataggctaaataaatgctgctaccaaaaccaccacactgtgtttctttcaacaaa 227

                                     
Query: 600 acaacagtttattagaattttgcatt 625
           ||||||||||||||||||||||||||
Sbjct: 226 acaacagtttattagaattttgcatt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1026
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1016
Effective search space:   624840
Effective search space used:   624840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)