XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
TGCCTCAATAAAATTTTATGTTAAAGGTTTTACAGTTCATATACAGAATG
TTACCTTTCTTTAAAAGAAGGCTAAGTTATTTGTCACAGTTGTATGTCTA
TCAAAAACATGTGTTTCACCCTTTTGGAGTAGAATTATGAGAAATTTGCT
TTTCTATTTAGTGAGAAGCATTTATTACAAACAATACTTCAGGTCTGTTC
CCCCTTTGGGTGTTGGAGAGTTCCGTTAATTTGAATCTAGAAAAAGACCA
GAAATAAAACTATATTAATGCCAGGTTCATTCTTCCCAGTGTACTCTAAA
GTCAAGTGTACACTTTGCAAACCGATCATGTTACCTGTACTGAGAAAACT
CTTGTGCCCATGTGCCCGACTCTCCTTTTTCCACTGGTTTCCACACCTAT
TACCATTAACACAATTTTAAGGTGGGAAGCTAGAAACGATGATATTACCA
AATACTTACAGGCAGCTATTTCCAAAACATATTGTGGTCCTCCTAATGGT
CATATTAATATTTTATATAGCCTGATTATATTTTTGCCTTAACACATTTT
ATTACAAAATGACATACTCTGTGCTGTTATATAAATATACTTAATGACAT
CTCAGTGCAAATGTTGCCATTTTGTGACAAGGTGATCTGTTTTTGTTGTT
CCCTCGGGAGAGAAGAT

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTTCTTTTTCTTCTACACGTATTATTCTTAGGTT
TAGCCTTTTCATAGTGTCCCGGATTTCCTAGATATTTTGTGTCAGAAGTT
TTTTAGATTTAGCATTTTCTTTGACTGATGTATCCGTCTCTTCTAGCCTA
TCTTCAACACTTGAGCTTCTCTCTTCCATCTCTTGTATTCTGTTGGTGAA
GCTTGCCTCAGTAGTTCCTGTTTGAATTCCTAAATTTTTCACTCCTAGAA
TTCCCTCAGTTTGTTGTCTTTATTGATTCTATTTCCGTTTTCATGTCTTG
AACAATTCTATTAATTTTTTCTACTTTTTTGTGTTTTCTGGAATTTCTTT
AAGGGATTCAGCTCTTTCCTCTTTAAAGATGACCTTAAGTACCTCAATCA
TCTTTATATAGTTGGTTTTAAGGTCTTTTATTTGTGCTTCAAATATGTTG
TAATATTCTGAGCTTGCCATGGTAGGATAGCTGGGTATAGTGGAGACATA
TTGCCCTGGACATTTTTTATTGTGTTTTTATGCTGGCATCTAGGCATCTG
GATTTAAGAAGATAACAGATCTAGGTGCTGATTTCTGGTTTTGTTGCATG
GGTGTTTTTGTTTCTTGGTTTCTGTTTCCATTCTGTAGTTTTGGAGAGTA
TGAAGGCTATGTGT

Query= MSMg01no526_b18.b1 MSMg01no526_b18.b1 CHROMAT_FILE:
MSMg01no526_b18.b1 PHD_FILE: MSMg01no526_b18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:56 2005
         (654 letters)



>mm_chr5_46032513_46033566
          Length = 1054

 Score = 1017 bits (526), Expect = 0.0
 Identities = 563/582 (96%), Gaps = 12/582 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttgcctcaataaaattttatgttaaaggttttacagttcatatacagaatgtta 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gaattcttgcctcaataaaattttatgttaaaggttttacagttcatatacagaatgtta 511

                                                                       
Query: 65  cctttctttaaaagaaggctaagttatttgtcacagttgtatgtctatcaaaaacatgtg 124
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 510 cctttctttaaaagaaggctaagttatttgtcacagttgtatgtctatcaaacacatgtg 451

                                                                       
Query: 125 tttcacccttttggagtagaattatgagaaatttgcttttctatttagtgagaagcattt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tttcacccttttggagtagaattatgagaaatttgcttttctatttagtgagaagcattt 391

                                                                       
Query: 185 attacaaacaatacttcaggtctgttccccctttgggtgttggagagttccgttaatttg 244
           ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 390 attgcaaacaatacttcaggtctgttccccctttgggtgttggagagttccattaatttg 331

                                                                       
Query: 245 aatctagaaaaagaccagaaataaaactatattaatgccaggttcattcttcccagtgta 304
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 330 aatctagaaaaagaccagaaataaaactatattaatgccaggttcattcctcccagtgta 271

                                                                       
Query: 305 ctctaaagtcaagtgtacactttgcaaaccgatcatgttacctgtactgagaaaactctt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 270 ctctaaagtcaagtgtacactttgcaaaccgatcatgttacctgtactgagaaaactct- 212

                                                                       
Query: 365 gtgcccatgtgcccgactctcctttttccactggtttccacacctattaccattaacaca 424
                  ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 211 -------tgtgcccgactctcctttttccactggtttccacacctattaccactaacaca 159

                                                                       
Query: 425 attttaaggtgggaagctagaaacgatgatattaccaaatacttacaggcagctatttcc 484
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 158 attttaaggtgggaagctagaaacgatgatattaccaaatagttacaggcagctatttcc 99

                                                                       
Query: 485 aaaacatattgtggtcctcctaatggtcatattaatattttatatagcctgattatattt 544
           |||    |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98  aaa----attgtggtcctcctaatggtcatattaatattttatatagcctgattatattt 43

                                                     
Query: 545 ttgccttaacacattttattacaaaatgacatactctgtgct 586
           |||||||||||||||||||||||||||| |||||||||||||
Sbjct: 42  ttgccttaacacattttattacaaaatggcatactctgtgct 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space:   672336
Effective search space used:   672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)