XXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATCCGCGGAATTCACTAG
ACAGGAAGGAAGCAGAGATCTGTTCCCCTTCAGTAGCTACAGAATGTAAG
GTGAAGCCAACATTGTCTCTTGTGGTAATCAAACTCTTCATTTTAGTGTC
TCTAACCTCAGCTGTAGTGGAGATATGAGACAGGCAGGAACTCCTGTAAC
ATTTGAACTCTGCAGCTGCCCCAGTTTCTGAATTACAGCCTCCAGTGTAT
GGGAGCTGATGATGGTCCCTGTCTTGGGCTCCTCTGATCCTTTCAATAGC
TTTGTCACAGTTCATGGCCTGCTCTGACTGCCCTTCTGCTTAAGGGACGC
AGAATGGCTTCTGTTCATTGCACTGAATCCTGCTCAGTAGAAGGAATTTG
AAAGAAGATCAGAATTGCACCTAATGAAGAAGGAGAAAGGGCGGATACTA
TCCAAAGCAAGTAGAATGGGAAACAAACAAACATAATACTAAGTATCAAA
GTAAGTCTTTTTTTTTTTTTTTTTTTTTTTTTTGCTCCATGGGAGGGGGT
GGGTCGGTAGGAAATGAGACTGGCAAACTAAAAATAGGAGGGATTATGGA
GTGAGCTGTTTGCTTTTGTGCAGCTGACATTAAGAAGATGTTGAGAGACC
TAAGCCAGGGGATGTTGTTAAGGCTATATTCTTTGGATCCCCATTTTTGG
GCTTTATGAAAGACCAACTGGGGAAGCCCAAAAAGGAAAACAAGCTC

CGCCGACGGCTGGGTTTCTCTCCATCCACCACATAATAAGGTTAACAATT
NTAGGCTCCACCGCCAGTCATAAATTGTGGGTGGGGGCTCGGGGCGGCGG
GGTGGAGACGACAGAAGATAAATAAGAAGGACAACAAAGAAAGGGGGCGA
CTGTAAAATAGACATGAAAAACACACGCGATAGTAGCAAAAACCCCAGGA
CCACAACTTGCTGCGGGGCAGGTGACACCCGTTTACCCCCACCTCTTACA
ACTAACATTTAGCGTGCTGTAGACACTGCTGCGTTGCCTGGTCCTGGTAG
TGACGAGCCCGTGGGTACGGCGCTCCACACGCCAGCGTTCGACCCGCGAG
CTAAATATCACCACACACATCCCATCACTAAATTCTCACCCCACCAACAT
AGTGCCTCGTACTGGCCTGGAGCACGGTGATAAAGTCGGCCTCTCGATCA
TGCTCTTCACACCATCTTGCTACACTGCCTCACACCCAGATNTCCATTAA
CAGCACCCATTAAACCTATACTTTGCGGCGTCACCCTGTATGACACGAGA
CGTCTCTGCCTGCAGCGCCGTGCACGATAAAGACGGAGTTGACGAGCCCT
TGTTATCACCGCGCACCCGTCTTACCATCTATCCAGCTGCAACCATTATT
ACACACGATGTTCGAGAGCCACTTCTACGACCATTAATATACACAACACA
CTCTGTGGCGCGGTATTTTTATCTGCCGTTGTTTATCCGACAAGTGAGCG
CGGCGACGAGACACGAGAACAGAGAATTCAGCCTCCGCGCGTACACCGAA
CGCACCATATCGCATACCTGCCTGGGTTTGGCACGACTGTTGGTGCTGGA
AACAGCGGGCAGGTAGATAGTATCGCAGATCGACGCATAGAGGAGAGAAC
CGGCGATTGTAGCTGACGGATAACCCGCACTCATTCTGTTCTTTATGCTT
CCACCCCCGCCCTGATTACACCGCCCATGTGACCGAATATAGCGCGCGCG
CCGCGCACTGCCTGAGTTAA

Query= MSMg01no526_d02.b1 MSMg01no526_d02.b1 CHROMAT_FILE:
MSMg01no526_d02.b1 PHD_FILE: MSMg01no526_d02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:02 2005
         (535 letters)



>mm_chr5_5916211_5917142
          Length = 932

 Score =  849 bits (439), Expect = 0.0
 Identities = 501/537 (93%), Gaps = 26/537 (4%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcactagacaggaaggaagcagagatctgttccccttcagtagctacagaatgtaa 66
           ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 199 gaattcactaggcaggaaggaagcagagatctgttccccttcattagctacagaatgtaa 258

                                                                       
Query: 67  ggtgaagccaacattgtctcttgtggtaatcaaactcttcattttagtgtctctaacctc 126
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ggtgaagccaacattgtctcttgtggtaatcaaactcttcattttagtgtctctaacctc 318

                                                                       
Query: 127 agctgtagtggagatatgagacaggcaggaactcctgtaacatttgaactctgca----- 181
           ||||||||||||||||||||||||||||||||||||||||||||||| |||||||     
Sbjct: 319 agctgtagtggagatatgagacaggcaggaactcctgtaacatttgatctctgcatgtca 378

                                                                       
Query: 182 ---gctgccccagtttctgaattacagcctccagtgtatgggagctgatgatggtccctg 238
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gcagctgccccagtttctgaattacagcctccagtgtatgggagctgatgatggtccctg 438

                                                                       
Query: 239 tcttgggctcctctgatcctttcaatagctttgtcacagttcatggcctgctctgactgc 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tcttgggctcctctgatcctttcaatagctttgtcacagttcatggcctgctctgactgc 498

                                                                       
Query: 299 ccttctgcttaagggacgcagaatggcttctgttcattgcactgaatcctgctcagtaga 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ccttctgcttaagggacgcagaatggcttctgttcattgcactgaatcctgctcagtaga 558

                                                                       
Query: 359 aggaatttgaaagaagatcagaattgcacctaatgaagaaggagaaagggcggatactat 418
           |||||||||||||||   ||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 559 aggaatttgaaagaa---cagaattgcacctaatggagaaggagaaagggcagatactat 615

                                                                       
Query: 419 ccaaagcaagtagaatgggaaacaaacaaacataatactaagtatcaaagtaagtctttt 478
            ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 616 tcaaagcaagtagaatgggaaacaaacaaacataatactaagcatcaaagtaactctttt 675

                                                                    
Query: 479 ttttttttttttttttttttttgctccatgggagggggtgggtcggtaggaaatgag 535
           ||||||||               ||| |||||||||||||||| |||||||||||||
Sbjct: 676 tttttttt---------------ctcgatgggagggggtgggttggtaggaaatgag 717


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 932
Length adjustment: 10
Effective length of query: 525
Effective length of database: 922
Effective search space:   484050
Effective search space used:   484050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)