Query= MSMg01no526_d07.b1 MSMg01no526_d07.b1 CHROMAT_FILE:
MSMg01no526_d07.b1 PHD_FILE: MSMg01no526_d07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:03 2005
(655 letters)
>mm_chr5_35480600_35481654
Length = 1055
Score = 1224 bits (633), Expect = 0.0
Identities = 645/649 (99%)
Strand = Plus / Minus
Query: 7 gaattccctgttagcctgcttgggtatggaaatgggtctgggttctgtggggcacgatct 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 gaattccctgttagcctgcttgggtatggaaatgggtctgggttctgtggggcacgatct 796
Query: 67 tgcttttaacagaggagaactgaaggcttatgttaccaagtgctacggtgcctgaaatgt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tgcttttaacagaggagaactgaaggcttatgttaccaagtgctacggtgcctgaaatgt 736
Query: 127 acggtggcgtgctctgcaagactccagggagggcaaggctgcttcctatcactagcggaa 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 acggtggcgtgctctgcaagactccagggagggcaaggctgcttcctatcactagcggaa 676
Query: 187 cctggggcgaggagaagattggtgctgctatgtttctccaccgtgttccaccagcatgac 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 cctggggcgaggagaagattggtgctgctatgtttctccaccgtgttccaccagcatgac 616
Query: 247 aattttcataattaagaaaaatcccgattttccatagaacagatttccaggaggctcagc 306
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 615 aattttcataattaagaaaaatcccgattttccatagaacaaatttccaggaggctcagc 556
Query: 307 catctggcacataggcatatgcccaaaagcaagcaagaggactgctgagcagccagtcat 366
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 catctggcacataggcatacgcccaaaagcaagcaagaggactgctgagcagccagtcat 496
Query: 367 gccgccacagcgcctgcccggcaggctgcgagcccgtgatgggtacttattgatggaacc 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gccgccacagcgcctgcccggcaggctgcgagcccgtgatgggtacttattgatggaacc 436
Query: 427 tagcatctgctcctcttccatctgctctgacttccatgaagagatctgtgtggcttagga 486
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tagcatccgctcctcttccatctgctctgacttccatgaagagatctgtgtggcttagga 376
Query: 487 gaggctgactccaccccacctggaacattccgtgcctctgaccagagactcaaggacact 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gaggctgactccaccccacctggaacattccgtgcctctgaccagagactcaaggacact 316
Query: 547 gtgtattctgagccagcccagtcacttcagtctgagcatgaatgaagtcccagtcaccct 606
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gtgtattctgagccagcccagtcacttcagtctgagcatgaatgaagtcccagtcacccc 256
Query: 607 ggcaggtcctggcaaacagccagggaacacaagggcctgataaagctga 655
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ggcaggtcctggcaaacagccagggaacacaagggcctgataaagctga 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_d07.g1 MSMg01no526_d07.g1 CHROMAT_FILE:
MSMg01no526_d07.g1 PHD_FILE: MSMg01no526_d07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:03 2005
(673 letters)
>mm_chr5_35447412_35448478
Length = 1067
Score = 1205 bits (623), Expect = 0.0
Identities = 658/673 (97%), Gaps = 6/673 (0%)
Strand = Plus / Plus
Query: 1 caatcccctaaggaaatgctttacccaaattaaccagctccattagcaactggggcttct 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatcccctaaggaactgctttacccaaattaaccagctccattagcaactggggcttct 260
Query: 61 gcaatctccatacagtcttatctcagggcaccggttttttttttttttttctttcattgg 120
||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 gcaatctccatacagtcttatctcagggcaccg------tttttttttttctttcattgg 314
Query: 121 agtaaatacagataaagaaaagacttgcaagtctggccccatgtagaaagtgccctccct 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 315 agtaaatacagataaagaaaagacttccaagtctggccccatgtagaaagtgccccccct 374
Query: 181 cccctctacctccatctgaattggctctttggaaaattagctttttgggcagaagtgtcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 375 cccctctacctccatctgaattggctctttggaaaattagctttttgggcagaggtgtcc 434
Query: 241 acagctaggaagggtgggtgtcactcattctttagggtccctaattgcactaaaggcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 acagctaggaagggtgggtgtcactcattctttagggtccctaattgcactaaaggcaac 494
Query: 301 cacaggcccttgacaccagcaccaagttcctttagggcctatgggtctcttaatacaagt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 495 cacaggcccttgacaccagcaccaagttcctttagggcctatgggtctcttattacaagt 554
Query: 361 gaggtcaagctggcccacctgacttttaaaggggggctgtacaaagggtaggccgttccc 420
||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 555 gaggtcaagatggcccacctgacatttaaaggggggctgtacaaagggtaggccgttccc 614
Query: 421 cgtcccagaggctatgctggcctctcaatcagggccctgctctccttcgctcacacgcag 480
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 cgtcccagaggttatgttggcctctcaatcagggccctgctctccttcgctcacacgcag 674
Query: 481 cacctcgcccccatccccgcgcgtctccctggccccgctcacccgcttggccttctccca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 cacctcgcccccatccccgcgcgtctccctggccccgctcacccgcttggccttctccca 734
Query: 541 tagctggttcagcttctccatgcggaactcctccccggactcgcgcttggcggccatctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tagctggttcagcttctccatgcggaactcctccccggactcgcgcttggcggccatctc 794
Query: 601 cggctcgttcttctctcgcgagtacttgccgccatggcctgctatgggctggggcacaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 cggctcgttcttctctcgcgagtacttgccgccatggcctgctatgggctggggcacaag 854
Query: 661 catcagcggcagc 673
|||||||||||||
Sbjct: 855 catcagcggcagc 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1067
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1057
Effective search space: 700791
Effective search space used: 700791
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
