Query= MSMg01no526_f09.b1 MSMg01no526_f09.b1 CHROMAT_FILE:
MSMg01no526_f09.b1 PHD_FILE: MSMg01no526_f09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:13 2005
(545 letters)
>mm_chr5_65720906_65721850
Length = 945
Score = 1023 bits (529), Expect = 0.0
Identities = 538/541 (99%)
Strand = Plus / Minus
Query: 5 gaattccaggacttacagagctatacagagaaatcctgttttgaaaaaccaaaaccaaaa 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 802 gaattccaggacaaacagagctatacagagaaatcctgttttgaaaaaccaaaacctaaa 743
Query: 65 gaaaagaaatatagttttgcattttagtggtttacaaagtagaagcttgttaaatatttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gaaaagaaatatagttttgcattttagtggtttacaaagtagaagcttgttaaatatttg 683
Query: 125 agtagtctttgtgaagtatgttgatgataatttttcttgtgaatttggtgggtcatttag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 agtagtctttgtgaagtatgttgatgataatttttcttgtgaatttggtgggtcatttag 623
Query: 185 aatgttaaacaatatttgtatttctttgctcattttaaaatagagaagtaagaccaatgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aatgttaaacaatatttgtatttctttgctcattttaaaatagagaagtaagaccaatgt 563
Query: 245 gtattgccgtgtcagctgctctgcagagcatcaaaggcaaatgacagtgacatagtttgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gtattgccgtgtcagctgctctgcagagcatcaaaggcaaatgacagtgacatagtttgt 503
Query: 305 gccctctctcctttcacatctaccacatctgctggttgagctcctaacaagtgcagaaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gccctctctcctttcacatctaccacatctgctggttgagctcctaacaagtgcagaaca 443
Query: 365 gtaatgagagctgcttctgtctgcttcagagcaacgtgcatcagtgtttatactccaggg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gtaatgagagctgcttctgtctgcttcagagcaacgtgcatcagtgtttatactccaggg 383
Query: 425 tttctgaagccgaagttcatctaatgctgcatttcttctgggtttgtgagggtatagtaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tttctgaagccgaagttcatctaatgctgcatttcttctgggtttgtgagggtatagtaa 323
Query: 485 aaagttttgtttttcatctctacttatgctagtagatttgaaaccaacttggaaatgtct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aaagttttgtttttcatctctacttatgctagtagatttgaaaccaacttggaaatgtct 263
Query: 545 t 545
|
Sbjct: 262 t 262
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_f09.g1 MSMg01no526_f09.g1 CHROMAT_FILE:
MSMg01no526_f09.g1 PHD_FILE: MSMg01no526_f09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:14 2005
(573 letters)
>mm_chr5_65566983_65567955
Length = 973
Score = 1023 bits (529), Expect = 0.0
Identities = 563/575 (97%), Gaps = 8/575 (1%)
Strand = Plus / Plus
Query: 1 ctttacctcagaaaccttagatcaatacaggcactgagctaaagggtaggagggcatatg 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 ctttacctcagaaaccttagatcaatacaggcgctgagctaaagggtaggagggcatatg 260
Query: 61 tcttacacacaaatcgatcataaagcaaaggagaggaccacatgttagttcattcagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttacacacaaatcgatcataaagcaaaggagaggaccacatgttagttcattcagagc 320
Query: 121 ttactggagggtgttttatattcgtttttatttagcacgcgttcctatattcgtatttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttactggagggtgttttatattcgtttttatttagcacgcgttcctatattcgtatttgt 380
Query: 181 ggttagcgtgtacctgttctgccttctcatataggacctcactccctttgtacgaacgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggttagcgtgtacctgttctgccttctcatataggacctcactccctttgtacgaacgaa 440
Query: 241 catagatatggaggagctgtggtgtttgggctgagtcacacccaagggagcggagtgcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catagatatggaggagctgtggtgtttgggctgagtcacacccaagggagcggagtgcag 500
Query: 301 ggttaactaagagagtcccagaggttttactcttcttgtgctggggatggaggcaggctg 360
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 ggttaattaagagagtcccagaggttttactcttcgtgtgctggggatggaggcaggctg 560
Query: 361 ggagagggctggaaagtatgagtggggggatgggaaagccagaccagtgccatcatcagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggagagggctggaaagtatgagtggggggatgggaaagccagaccagtgccatcatcagg 620
Query: 421 aagtaaggggcagtcagggatgatggcagtgttgtacatatgcaaagggtgtgtgttgtg 480
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 aagtaaggggcagtcagggatgatggcagtgttgtacatatgcagagggtgtgtgttgtg 680
Query: 481 tgtgtgtgtgagagaggagagagaaagagagagagagatcagaccatttgttatttt-ca 539
|||||||||||||||| || |||| |||||| | |||||||||||||||||||||| ||
Sbjct: 681 tgtgtgtgtgagagag-ag-gaga--gagaga-a-agatcagaccatttgttattttaca 734
Query: 540 taccaatcctactgttaaagaa-tctggaattatt 573
|||||||||||||||||||||| ||||||||||||
Sbjct: 735 taccaatcctactgttaaagaaatctggaattatt 769
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
