Query= MSMg01no526_i14.b1 MSMg01no526_i14.b1 CHROMAT_FILE:
MSMg01no526_i14.b1 PHD_FILE: MSMg01no526_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:29 2005
(614 letters)
>mm_chr5_132342169_132343180
Length = 1012
Score = 996 bits (515), Expect = 0.0
Identities = 581/611 (95%), Gaps = 17/611 (2%)
Strand = Plus / Plus
Query: 5 gaattctgtactatatctggctatatgtgtgtgctggggattcaaagtcaggtacatagg 64
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtactatacctggctttatgtgtgtgctggggattcaaagtcaggtacatagg 264
Query: 65 ttagcatggcaaagactttatcccctgaactctctctagccccggcttggcatctgggag 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctagcatggcaaagactttatcccctgaactctctctagccccggcttggcatctgggag 324
Query: 125 acacttacatagggaatgtgtgtgtatctccaaacagcttcctgtaactgagggaaaaga 184
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 325 acacttacatagggaatgtgtgtgtatctccaaacaccttcctgtaactgagggaaaaga 384
Query: 185 agttgaagcctttcccaaagggagtgatggcatgtgaatgagcagaaatgtaaacgccaa 244
||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 385 agttgaagcctttcccaaagggagt-atggcatgt-----------aatgtaaacgccaa 432
Query: 245 aacttttgttggtggaattaaatgccagggtctcgggccgacagttcctgggtctgctta 304
|||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 433 aactttcgttggtggaattaaatgctagggtctcgggccgacagttcccgggtctgctta 492
Query: 305 agtggaggcacaaagatctacaagtcaaggactacatgttagaatatactcagggtgctg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agtggaggcacaaagatctacaagtcaaggactacatgttagaatatactcagggtgctg 552
Query: 365 cccatgacacctgcatttccagcgaggttcaaggaacgtgcttcagtgggcagagtgcta 424
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 553 accatgacacctgcatttccagcaaggttcaaggaacgtgcttcagtgggcagagtggta 612
Query: 425 gcccagtgggcacaatgcactgactctgtccccagcagcacagaacaatagtgatagcac 484
|||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gcccagtgtgcacgatgtactgactctgtccccagcagcacagaacaatagtgatagcac 672
Query: 485 accactctgaccccagcactcagggagg--tggaggcaggaggattaagattcaagtcct 542
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 673 accactctgaccccagcactcagggaggcgtgg--gcaggaggattaagattcaagtcct 730
Query: 543 tagttatataccaatttcattgccaacctgaaggagatcctatctgagactctgccccta 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 731 tagttatataccaatttcattgccaacctgaaggagatcctatctgagactctgccc-ta 789
Query: 603 atacccatccc 613
|||||||||||
Sbjct: 790 atacccatccc 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1012
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1002
Effective search space: 605208
Effective search space used: 605208
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_i14.g1 MSMg01no526_i14.g1 CHROMAT_FILE:
MSMg01no526_i14.g1 PHD_FILE: MSMg01no526_i14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:29 2005
(556 letters)
>mm_chr5_132509630_132510585
Length = 956
Score = 648 bits (335), Expect = 0.0
Identities = 344/347 (99%)
Strand = Plus / Minus
Query: 210 cacacacacacacatgggcaagcatgtacatactcaaaagaatatctaggagagctttga 269
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 956 cacacacacacacacgggcaagcatgtacatactcaaaagaagatctaggagagctttga 897
Query: 270 gatgtctcattggttaagagcacttgacactcttgtcgggcacccaggttaagttcccag 329
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 896 gatgtctcattggttaagagcacttgacactcttgtcgggcacccaagttaagttcccag 837
Query: 330 ctcctactttgggtagctcacaaccacctgtaattctagctacaataaatctgatttctt 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ctcctactttgggtagctcacaaccacctgtaattctagctacaataaatctgatttctt 777
Query: 390 tttctgccctgtacgggcactaaatagctctccatatgtagagaggatttaatttttttt 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tttctgccctgtacgggcactaaatagctctccatatgtagagaggatttaatttttttt 717
Query: 450 taaggtaatcagctacactaacaatttccagttcaacttgatatacataaggccctgtta 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 taaggtaatcagctacactaacaatttccagttcaacttgatatacataaggccctgtta 657
Query: 510 tttataagtaaaaaattaacaaacaaatgataaaatattattgaaat 556
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 tttataagtaaaaaattaacaaacaaatgataaaatattattgaaat 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
