XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCA
ATTCTGAATATCTATGCTCCAAATGCAAGGGCAGCCAAGTTCATTAAAGT
AACTTTAGTAAAGCTCAAAGCACACATTACCCCTCACACAATAATAGTGG
GAGACTTCAACACACCACTTTCATCAATGGACAGATCGTGGAAACAGAAA
CTAAACAGGGACACAGTGAAACTTACAGAAGTTATGAAACAAATGGACTT
AACAGATATCTACAGAACATTTTATCCTAAAACAAAAGGATATACCTTCT
TCTCAACACCTCACGGGACCTTCTCCAAAATTGACCATATAATTGGTCAC
AAAACAGGCCTCAACAGATACAAAAATATTGAAATTGTCCCATGCATCCT
ATCAGACCACCATGTACTAAGGCTGATCTTCAATAACAACATAAATAATG
GAAAGCCAACATTCTCATAGAAACTGAACAACACTCTTCTCAATGATACC
TTGGTCAAGGAAGGAATAAAGACAGAAATTAAAGACTCTTTAGAGTTTAA
TGAAAATGAAGCTACAACATACCCAATCTTATGGGACACAATGAAAGCAC
TTCTAAGAGGAAAACTCATAGCTCTGAGTGCCTCCNAAAAGAAACTAGAG
AGAGCACACACTAGCAGCTTGGCAACACACCTAAAAGCTCCAGAAAAAAG
GAAGCNAATTCACCTAGAAGAATAGACTGCAGGAAATAATCAACTCACGG
GT

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTTCCTTTCCATGTCATACCTGACTTTCCTTAGTA
CCAAAGTTAAGTGTAGATGAATGAGGCTAACTAAAGCCTTCAGGCACTGT
GTTCTTTCCTCTCTGCTTCTTTTGGAAATAAAGCACTTCATTCATCCTTC
ATCTCTTCTATGCACATTTCTCACTGTCTGCCCTTTAAATTCTGAAGCTG
TCATTCATCACCCCAGCAAATATTCCCTGATATAAGCCTTCCCAACTTTT
CAGCTTTTGCACTGAAACATCCATCCAGCTCCTCGTTAATAAAGATGAGT
GGGCTCACTAGAGACATTATTATACTAGGTGTGTTTGTGTGATGGCACAC
ACACTCACACACACACACACACACACCTGCTAATTTTAATGCAGTTGGAA
TCACTAACCACCCAGGTCTCACTATGTTTCTCTAGAGAGTACTTGTCTTA
AAAATCATGAATTTCTAGGATCCACTATGGTTTACATTAAGTTTGTATTG
ATGAGTCATATAGACATTTTGTTTTCTATTTTCATGAATTTATTATAATG
ATGTATTAAAATGCAGATAAGCAATTTACTCGTAAGGGTAGCTTTCTCTT
TGCTGTTTTCCTTAGCAGGCAATACATTTGTCCCTCAAATTACAGCAAAC
AATAGTTTTTAAAAAATTGTTTGTCATTTCATCAAGGTG

Query= MSMg01no526_m22.g1 MSMg01no526_m22.g1 CHROMAT_FILE:
MSMg01no526_m22.g1 PHD_FILE: MSMg01no526_m22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:51 2005
         (600 letters)



>mm_chr5_78911913_78912911
          Length = 999

 Score = 1133 bits (586), Expect = 0.0
 Identities = 598/604 (99%), Gaps = 5/604 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttcctttccatgtcatacctgactttccttagtaccaaagttaagtgtagatgaatgag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tttcctttccatgtcatacctgactttccttagtaccaaagttaagtgtagatgaatgag 256

                                                                       
Query: 61  gctaactaaagccttcaggcactgtgttctttcctctctgcttcttttggaaataaagca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gctaactaaagccttcaggcactgtgttctttcctctctgcttcttttggaaataaagca 316

                                                                       
Query: 121 cttcattcatccttcatctcttctatgcacatttctcactgtctgccctttaaattctga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 cttcattcatccttcatctcttctatgcacatttctcactgtctgccctttaaattctga 376

                                                                       
Query: 181 agctgtcattcatcaccccagcaaatattccctgatataagccttcccaacttttcagct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agctgtcattcatcaccccagcaaatattccctgatataagccttcccaacttttcagct 436

                                                                       
Query: 241 tttgcactgaaacatccatccagctcctcgttaataaagatgagtgggctcactagagac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tttgcactgaaacatccatccagctcctcgttaataaagatgagtgggctcactagagac 496

                                                                       
Query: 301 attattatactaggtgtgtttgtgtgatggcacacacactcacacacacacacacacaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 attattatactaggtgtgtttgtgtgatggcacacacactcacacacacacacacacaca 556

                                                                       
Query: 361 c----ctgctaattttaatgcagttggaatcactaaccacccaggtctcactatgtttct 416
           |    |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cacacctgctaattttaatgcagttggaatcactaaccacccaggtctcactatgtttct 616

                                                                       
Query: 417 ctagagagtacttgtcttaaaaatcatgaatttctaggatccactatggtttacattaag 476
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 617 ctagagagtacttgtcttaaaaatcatgaatttctagaatccactatggtttacattaag 676

                                                                       
Query: 477 tttgtattgatgagtcatatagacattttgttttctattttcatgaatttattataatga 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tttgtattgatgagtcatatagacattttgttttctattttcatgaatttattataatga 736

                                                                       
Query: 537 tgtattaaaatgcagataagcaatttactcgtaagggtagctttctctttgctgttttcc 596
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tgtattaaa-tgcagataagcaatttactcgtaagggtagctttctctttgctgttttcc 795

               
Query: 597 ttag 600
           ||||
Sbjct: 796 ttag 799


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 999
Length adjustment: 10
Effective length of query: 590
Effective length of database: 989
Effective search space:   583510
Effective search space used:   583510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)