Query= MSMg01no526_o10.b1 MSMg01no526_o10.b1 CHROMAT_FILE:
MSMg01no526_o10.b1 PHD_FILE: MSMg01no526_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:58 2005
(594 letters)
>mm_chr5_76569246_76570239
Length = 994
Score = 1116 bits (577), Expect = 0.0
Identities = 587/591 (99%), Gaps = 3/591 (0%)
Strand = Plus / Minus
Query: 5 gaattcatcgtgggagtt--aaaaaaaaaaaaaagaaagaaagaaagaaaaggaaaggaa 62
||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 gaattcatcgt-ggagttaaaaaaaaaaaaaaaagaaagaaagaaagaaaaggaaaggaa 784
Query: 63 agccatgtggcgggtctcacatattctcagcggagtccatatgtaccccggaagatttta 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 agccatgtggcgggtctcacatattctcagcggagtccatatgtaccccggaagatttta 724
Query: 123 gtatttcacaacttggttactgagccttccgggatgggttggggcagggcatactgggct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 gtatttcacaacttggttactgagccttccgggatgggttggggcagggcatactgggct 664
Query: 183 agtttgccagagcacctgtggagatgcaggttagtgatgtctgcacagccccaggggagc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 agtttgccagagcacctgtggagatgcaggttagtgatgtctgcacagccccaggggagc 604
Query: 243 acactctggacttctttcttgactgtgacagatcgggctgagaactgcggaaatcgagga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 acactctggacttctttcttgactgtgacagatcgggctgagaactgcggaaatcgagga 544
Query: 303 agaacttgcctccaagtccatgaatttccacgacctcaagttctggggaggggaagcgga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 agaacttgcctccaagtccatgaatttccacgacctcaagttctggggaggggaagcgga 484
Query: 363 aaactgggggtaaagaagtcagggcggctccctgggggccgggccaacttgagatgctct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aaactgggggtaaagaagtcagggcggctccctgggggccgggccaacttgagatgctct 424
Query: 423 gtcatttccggggacggctcggggacagcccctggctcacgtgcctgcgccgcctctgtt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gtcatttccggggacggctcggggacagcccctggctcacgtgcctgcgccgcctctgtt 364
Query: 483 gccccctgccgggcgcgccccgccaccgaggttacctcttggggacatcgaaggccctgc 542
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 363 gccccctgccgggcgcgccccgccaccgacgttacctcttggggacatcgaaggccctgc 304
Query: 543 agacggcggggcgccgcgagccggactgcttggtcttcccgtagcggagca 593
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agacggcggggcgccgcgagccggactgcttggtcttcccgtagcggagca 253
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space: 574656
Effective search space used: 574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_o10.g1 MSMg01no526_o10.g1 CHROMAT_FILE:
MSMg01no526_o10.g1 PHD_FILE: MSMg01no526_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:58 2005
(424 letters)
>mm_chr5_76372732_76373555
Length = 824
Score = 797 bits (412), Expect = 0.0
Identities = 421/424 (99%)
Strand = Plus / Plus
Query: 1 tctgggctttaaagcaacttgcttctctatggaacccagggcaagcacacgttccaggct 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 tctgggctttaaagcaacttgcttctctatggaacccagggcaagcacatgttccaggct 260
Query: 61 gtctttctcttcccagaaagggggagagtgcggccttctcaggaacaagagggcactcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctttctcttcccagaaagggggagagtgcggccttctcaggaacaagagggcactcgt 320
Query: 121 ggtggagctagcctgatgaaccaagtcattatgaggaaaactcaatagctctagacaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtggagctagcctgatgaaccaagtcattatgaggaaaactcaatagctctagacaggc 380
Query: 181 gatcttggcgccgtatgtcagcgccagtgcttttaagccatgcgattctcttagggcgca 240
||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 381 gatcttggcgccgtatgtcagtgccaatgcttttaagccatgcgattctcttagggcgca 440
Query: 241 aggaatgtttctgcagaattgacttcttttttcctgattctccattctccaatgggtgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggaatgtttctgcagaattgacttcttttttcctgattctccattctccaatgggtgga 500
Query: 301 gattggaaatctgcaaactgtggcttcaaaaaggaaatgacagagaaatagaggaggaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gattggaaatctgcaaactgtggcttcaaaaaggaaatgacagagaaatagaggaggaag 560
Query: 361 aggaggaggaaaaggaagagggaaagggaagggaagggaagggaagggaagggaagggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggaggaggaaaaggaagagggaaagggaagggaagggaagggaagggaagggaagggaa 620
Query: 421 ggga 424
||||
Sbjct: 621 ggga 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
