Query= MSMg01no526_o11.b1 MSMg01no526_o11.b1 CHROMAT_FILE:
MSMg01no526_o11.b1 PHD_FILE: MSMg01no526_o11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:58 2005
(650 letters)
>mm_chr5_84577633_84578681
Length = 1049
Score = 1139 bits (589), Expect = 0.0
Identities = 634/651 (97%), Gaps = 5/651 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctaaaggaaaactactgcttgaacatggcccaatcaaaataatagttgagatt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ggaattcctaaaggaaaactactgcttgaacatggcccaatcaaaataatagttgagatt 259
Query: 64 tttactttctgtaattatacagcatctaatcctactttgaatatatatgtataacatatg 123
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tttactttctgtaattatagagcatctaatcctactttgaatatatatgtataacatatg 319
Query: 124 cacatatgtatatgcataatattata----atatatgtatatttgtaatatatatgtaat 179
|||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 320 cacatatgtatatgcataatattataatatatatatgtatatttataatatatatgtaat 379
Query: 180 gttttgtatattttttctaaaggtttagattattgcagtattcaacactaatagaatata 239
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 380 gttttgtatattttttctaaagttttagactattgcagtattcaacactaatagaatata 439
Query: 240 cattcaactaagactattataatcagcaggttacataacttgtcttttatacaaatcaaa 299
|||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||
Sbjct: 440 cattcaactaagactattataatcagcaggtttcataacttgtcttttgtaaaaatcaaa 499
Query: 300 tctaagattaaattatgggatgaaataaattttcatagtctatgacattttgtatgtaaa 359
||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 500 tctaagattaaattatgagatgaaataatttttcatagtctatgacattttgtttgtaaa 559
Query: 360 tatacactattaagtttatttaaaggttgatatgaaaattaagcattagaatccaatttc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tatacactattaagtttatttaaaggttgatatgaaaattaagcattagaatccaatttc 619
Query: 420 tctatttttaaattcaactcaagtatgcaatttttttatatagaaaagaaataagtaatt 479
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 620 tctatttttaaattcaactcaagtatgcaatttttt-atatagaaatgaaataagtaatt 678
Query: 480 tccaccaataagttctttttctttataatatctagtggggtagtattaaggaccctgttc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tccaccaataagttctttttctttataatatctagtggggtagtattaaggaccctgttc 738
Query: 540 attacttaataaaacttatttatttaaatcaattacaaaggctttaaacagaagcaaatt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 attacttaataaaacttatttatttaaatcaattacaaaggctttaaacagaagcaaatt 798
Query: 600 ttgtttcctccaaggcaatatcacatgagtttgctaaaacagtattttaat 650
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 799 ttgtttcctccaaggcaatatcaaatgagtttgctaaaacagtattttaat 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1049
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1039
Effective search space: 664960
Effective search space used: 664960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_o11.g1 MSMg01no526_o11.g1 CHROMAT_FILE:
MSMg01no526_o11.g1 PHD_FILE: MSMg01no526_o11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:58 2005
(623 letters)
>mm_chr5_84621943_84622965
Length = 1023
Score = 1160 bits (600), Expect = 0.0
Identities = 615/620 (99%)
Strand = Plus / Minus
Query: 1 ctcaggcaggggaggaaagaacaaatatttatatatcctgccaggacctggaggtgctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctcaggcaggggaggaaagaacaaatatttatatatcctgccaggacctggaggtgctcc 561
Query: 61 atggcaaacaactgagaatactggatagaatatgtgtgggggtaggttattccaatatga 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atgacaaacaactgagaatactggatagaatatgtgtgggggtaggttattccaatatga 501
Query: 121 tatattccaactctctgtttttcaggcaaaaataaccaatatttcaaaaaaagtatttct 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 500 tatattccaactctctgtttttcaggcagaaataaccaatatttcaaaaaaagtatttct 441
Query: 181 tagagtattttcatataaacaaaaattcagatttggaaacttagttaatacttaaattca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tagagtattttcatataaacaaaaattcagatttggaaacttagttaatacttaaattca 381
Query: 241 taaatcatttttattaaaatatgaggaccacactaacataaataagtggctttctcaatt 300
| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgaatcatttttattaaagtatgaggaccacactaacataaataagtggctttctcaatt 321
Query: 301 atctaagttaaattatcatttcttttcagtttgtaacaaattttcttggatgtataaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atctaagttaaattatcatttcttttcagtttgtaacaaattttcttggatgtataaggc 261
Query: 361 actcatgtatcatggccttaaatctagattcggtattctttgaagattcaaaactagttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 actcatgtatcatggccttaaatctagattcggtattctttgaagattcaaaactagttg 201
Query: 421 ttatttttttacaattttaaaaattaattatattttgttaattttacacatttggatgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttatttttttacaattttaaaaattaattatattttgttaattttacacatttggatgtt 141
Query: 481 ttgtctgcatgtatattggtatatcatgtgcatgtttactctcagtctaggctagaaaat 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 140 ttgtctgcatgtatattggtatatcatgtgcatgtttactatcagtctaggctagaaaat 81
Query: 541 gtcaaaatagtccctggagctggagatataaacagttgtgaactgccatgtagactctca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 gtcaaaatagtccctggagctggagatataaacagttgtgaactgccatgtagactctca 21
Query: 601 gacttgaacccaaggctaat 620
||||||||||||||||||||
Sbjct: 20 gacttgaacccaaggctaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
