GGGACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCAAGGTGTCTTGCCTCTGTCTACTTTTCCAGATAATTAGCAC
TCATTCCTGACATTCTCAAAGTCATCTTGAAAGATACTCACTCCTGTGTA
GCACATACAAGTAGATGATGTCTATGGACTGTGGTAATGTACGAGGGCTG
CTTTGTCCCTCCTTGGTGTTAACAGCTTTAATAAGGCATGCTAGCACATA
ATGAGCAGGGCCCAATTCATTTTTATTGCAATGAACCTCCACCTCTAAAA
GTAGGAACACAATGGAGAAAAGGAAGAGAGCAATCACTGTTGTACTTCCT
CCCTTCCTTTGCTTGCTGTCTGTGCCCAGCCCCAGCGTAGCCTTTCCTCA
GTCATTCGTGGAAGTCTAGACTTCTGCATAAATGTAATCATGGAGATGTA
TGCTTTGAGGGTCTGGTTTCTTTCACTCACTTTAAGTATTCTTTAATCCA
TACAATGGTTATATAAACACAATCATGGAGTTTGCATGTTTGTTTGTTTT
TTTCAGTCTGCCTAATTGAGATTTATTTGTTTTGCAGCATCAACAGTTTA
TTCATTCTTGTTTAGTACTGTCCCATTCTCTGGATATAGACTGTTGGTTT
CTTTATACATTTGCTGTTGGCAGTCAGGTGACCTGTTCTTGTTCGTGTTA
TAAGCAACTGTGAGCATTTGCATGGATAGCTTAGTTGAGGATTGACTACA
TCATATTT

NNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTGGGCCATGCCTTGGCTTATGAGGC
TCAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAAT
TTAAGGCCACTGGTGTGACACTACTCATACAACTCCCTCACCATGAATCT
GTGAAAAGAAAAACAGGCAGGCCCTGGGGCTGAATGATATCACCCGTACT
AACTAACTATCCCAGCAATGGGAGCATCTACCACGGGTGAAACTACGGGG
AGCTCATCAATTCCTGGGTGTGGGTATGAATTTCTGGGTATGTGAAGAGG
CGTGCCAATTGCAGCCCATTTCTCAACTTTATCCTTACTGGGATGTGAAA
CTCAATGTTGTTAGGGTCAAGCTGGCTGAATGTCACATTGGTGAAGCTTC
CCTTCCATATCCAAAGGCATTTGTTCTAACTACTCTGTATGGAGAAAGAA
CTCTGACTGAACACAACTAACGGCGAGGGAGGTTTAATACGGGTCACAAT
GGTAAATCACTAACCATCACTGGGGGAAATCAGGGCAGAAACTTAAAAAA
GTAGCTTTGTTACCGAACTCAAGGCTACCTGCCTAAGGATGAATGGGCTG
CACCACCACATCAATTATCATTTAAGGGAATCTTTCTCAAACATGTCCGC
GGGTTCTTAACAGAAAATCCCTCTTTTCCCGAACGATTGGACACTCCACA
GGCGATATTTTCGC

Query= MSMg01no527_b13.b1 MSMg01no527_b13.b1 CHROMAT_FILE:
MSMg01no527_b13.b1 PHD_FILE: MSMg01no527_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:13 2005
         (701 letters)



>mm_chr5_132558322_132559423
          Length = 1102

 Score = 1042 bits (539), Expect = 0.0
 Identities = 560/567 (98%), Gaps = 1/567 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaaggtgtcttgcctctgtctacttttccagataattagcactcattcctgaca 64
           ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 567 gaattccaaggtgacttgcctctgtctacttttcaagataattagcactcattcctgaca 508

                                                                       
Query: 65  ttctcaaagtcatcttgaaag-atactcactcctgtgtagcacatacaagtagatgatgt 123
           ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ttctcaaagtcatcttggaagaatactcactcctgtgtagcacatacaagtagatgatgt 448

                                                                       
Query: 124 ctatggactgtggtaatgtacgagggctgctttgtccctccttggtgttaacagctttaa 183
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 447 ctatggactgtggtaatgtacgagggctgctttatccctccttggtgttaacagctttaa 388

                                                                       
Query: 184 taaggcatgctagcacataatgagcagggcccaattcatttttattgcaatgaacctcca 243
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 387 taaggcatgctagcacataatgaacagggcccaattcatttttattgcaatgaacctcca 328

                                                                       
Query: 244 cctctaaaagtaggaacacaatggagaaaaggaagagagcaatcactgttgtacttcctc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cctctaaaagtaggaacacaatggagaaaaggaagagagcaatcactgttgtacttcctc 268

                                                                       
Query: 304 ccttcctttgcttgctgtctgtgcccagccccagcgtagcctttcctcagtcattcgtgg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ccttcctttgcttgctgtctgtgcccagccccagcgtagcctttcctcagtcattcgtgg 208

                                                                       
Query: 364 aagtctagacttctgcataaatgtaatcatggagatgtatgctttgagggtctggtttct 423
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 207 aagtctagacttctgcataaatgtaatcatggagatgtatgcttggagggtctggtttct 148

                                                                       
Query: 424 ttcactcactttaagtattctttaatccatacaatggttatataaacacaatcatggagt 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ttcactcactttaagtattctttaatccatacaatggttatataaacacaatcatggagt 88

                                                                       
Query: 484 ttgcatgtttgtttgtttttttcagtctgcctaattgagatttatttgttttgcagcatc 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  ttgcatgtttgtttgtttttttcagtctgcctaattgagatttatttgttttgcagcatc 28

                                      
Query: 544 aacagtttattcattcttgtttagtac 570
           |||||||||||||||||||||||||||
Sbjct: 27  aacagtttattcattcttgtttagtac 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 701
Length of database: 1102
Length adjustment: 10
Effective length of query: 691
Effective length of database: 1092
Effective search space:   754572
Effective search space used:   754572
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)