ACTAATATTTGCGGCGCGGTGGGGGCGGAGGGGCGCTTAGCGGAGAGGAT
CCGCGGAATTCTTGTTTCCAGCTGCTCTTAGTGAAATAACATCCAAGCAA
GTGTTTAAATGAANATGGGCCCATGCTGGACCCATGCCCAAAGTCCTAAC
ACCATGGCAGAATCTTTTTAAAAGAATCTCCTGTCAATTCAGGACATGAA
ACCCCCTGAAGTGAATTTCCAGAAAGANNACTCATGCTAGATATTAATAA
AATTGCTTAGGAAAAAAACTACCATTACCCGGCCTATCCGCCAAAAAGGG
AAAAGCAAACCAATTTCTAACCCTTGGGGGTCCCAAGGGTTTAAAAATTT
TGGAAAAACCCCCAAACTTTTTTCGTAAAAAAAAGGTTTAATAATTTTTT
AATATTCCCCGGGGTTTTTTTTATTTTTAAAAAATTTGTGGGGCCCCCCC
TTGGGAAATATTTTGGTTCCCCCCTAAACCCCTGGGGAACCTTCCNGAAA
AAATATTTTTCCCCTTAAAAAAGCCCCCCCTAAAAAAAACACCTTTTTGT
AAAACCTCCTTTTTTTTTTTAAAAAGCCCCCCCCCCCNNNAAATAATCCC
CCCCCCCCTCTCTTCTTCCAAAAAAAAAAAAATTTTTTTTTTTTTTTAAT
AAAAAAAAAAAATTTTTTTTTTTCTCTCTCCCCCTTTTTTTTTTATTAAA
ATAAAGAGACATCCCCCTCCCCCAATAATTTTTATG

NNNNCCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTATTTTTGTCCACAC
TTCCAGATTTTTTCCCCCTGAAATCAGAGAAATATATAATTTAAGTTGTT
CTCTGCGAGAACGCTAAATTAGAATGTAGTTATGACTTCTAAACACAGTC
ACATAGCTTTCAGTACATATCTAAGATGACCACTACTCACGGTAGAGGCT
AACAATGGACTTAAAATTCAATAATTAGGAGACACCAAAAGGGTAACGAG
GATGAAAAAGACCTCTACCTTTGCCTTTCAGGTAATTCTGGGGGTTCTTG
GTTTTTATTGTTTTGTTTTATACTTTGTTTTGGGGGAAACAAGCATGTGA
AGGCCGGGTGTGGGTTAAAAGGAAGAAAGCCTATGTCACAAAGACTGAGC
TAGCACCTTGATAGCTCAGAGGAAGATGGGACAGAGAACCTTTGACCTTG
GTCTGGGAGCTAGTGGAAGGACCAGTAAGGCATGAGGAGGAAATGTTAGC
TTATGATGAACAAGGAAATCTTAGCCCTGGGACAAAGCTAAGAATCCAAC
TTGAAGAGCGGGAGAGAAGACAGAAAGGGGAAACGTAAGAGTTCATAGCC
TCCTCTGAGCAGGTGCAGTGTGAATTCAGCCCCAAGAGGTCATGACAAGG
TTCCAGTGCAGAGGACTCATGAGGACCCTGCTCTGCCCTAGATAGAAGAC
GGAGAAA

Query= MSMg01no527_f07.g1 MSMg01no527_f07.g1 CHROMAT_FILE:
MSMg01no527_f07.g1 PHD_FILE: MSMg01no527_f07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:32 2005
         (624 letters)



>mm_chr5_99217645_99218668
          Length = 1024

 Score = 1143 bits (591), Expect = 0.0
 Identities = 615/623 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttatttttgtccacacttccagattttttccccctgaaatcagagaaatatataattta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttatttttgtccacacttccagattttttccccctgaaatcagagaaatatataattta 260

                                                                       
Query: 61  agttgttctctgcgagaacgctaaattagaatgtagttatgacttctaaacacagtcaca 120
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttgttctctgcgagaaggctaaattagaatgtagttatgacttctaaacacagtcaca 320

                                                                       
Query: 121 tagctttcagtacatatctaagatgaccactactcacggtagaggctaacaatggactta 180
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 tagctttcagtacatatctaagatgaccactactcacagtagaggctaacaatggactta 380

                                                                       
Query: 181 aaattcaataattaggagacaccaaaagggtaacgaggatgaaaaagacctctacctttg 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 381 aaattcaataattaggagacaccaaaagggtaacgaggatgaaaaagacctccaactttg 440

                                                                       
Query: 241 cctttcaggtaattctgggggttcttggtttttattgttttgttttatactttgttttgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctttcaggtaattctgggggttcttggtttttattgttttgttttatactttgttttgg 500

                                                                       
Query: 301 gggaaacaagcatgtgaaggccgggtgtgggttaaaaggaagaaagcctatgtcacaaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 gggaaacaagcatgtgaaggccgggtgtgggttaaaaggaagaaagcctgtgtcacaaag 560

                                                                       
Query: 361 actgagctagcaccttgatagctcagaggaagatgggacagagaacctttgaccttggtc 420
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 actgagctagcaccttgatagctcagaggaagatgggacagagagcctttgaccttggtc 620

                                                                       
Query: 421 tgggagctagtggaaggaccagtaaggcatgaggaggaaatgttagcttatgatgaacaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgggagctagtggaaggaccagtaaggcatgaggaggaaatgttagcttatgatgaacaa 680

                                                                       
Query: 481 ggaaatcttagccctgggacaaagctaagaatccaacttgaagagcgggagagaagacag 540
           |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 681 ggaaatcttagccctgggacaaggctaagaatccaagttgaagagcgggagagaagacag 740

                                                                       
Query: 541 aaaggggaaacgtaagagttcatagcctcctctgagcaggtgcagtgtgaattcagcccc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaaggggaaacgtaagagttcatagcctcctctgagcaggtgcagtgtgaattcagcccc 800

                                  
Query: 601 aagaggtcatgacaaggttccag 623
           |||||||||||||||||||||||
Sbjct: 801 aagaggtcatgacaaggttccag 823


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space:   622596
Effective search space used:   622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)