CGAGGAGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCTCTATGACAATTTTAACAACAGATTCCTTTATACAA
AATGACAATTATCTGTAACAATCAGCTCAAGAAAAATAGGGGCTTTATTT
CAGTTGCCAGATAGTAACACAGATTAGACCTGTTCTCTACACATTAGTGG
AACAGCTTATTCGTTCATGCTGGCTTTGCTTCCATACAAAAGGAGGTCAG
AGCATGTCTGCCATCTGGCCTCTACTAAAAGCTTTCAAAAGTGACCTGTC
AAAAGGTGGAGCTGCTAAGTGGAAAGGATCAGTTCTTCAGAATTCACAAG
TGCACTGAAATAGCATTCAACCTATTGTGACAGTAAATGATAGATAAAGA
AACCCGAAATTGTAAATAATAGACATGTACTATCTGAGTGTCTTTTGAAA
TCATCCCATGTAACTCCTAAAGCTAATTGTAAAGAGGTGGAAACCACTCC
TATGGCAACATGAATGACAGACCCAAAGAATACTGAGAAGATCTAACCTA
GATCTAGGGTTAGGCTCCATGACAAGGGACTGTAAATTTTCTATTAAGTT
ACAAGTTTCCTTCAAAGTGAATGGGCTCTATTACTACTTAAAACAAGGCA
AACAAAATAAAGCTCTGCCATCTTCTATCTTGCCACCTTTCTGGGAATAT
GGATTATGCATCTTCTTGGTGCATGGGGTGGGTATAT

TTTTTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGAAAACATAAAGG
AACAGTAGAAGGAAATTAATAAAAGAGCAAAAGACCTGAAGGTAGAAATA
AACTCTCTAAAGAAAATCCAAACAGTGAATGCTGAAATGGGAAACATAGG
AAATTGAACAGGAACCTCGGAGGACAGCTTCATCAACAGAATACAAGAGA
AAGACTCTCAGACCTTAAGGACATGAAAAAAAAATGATTGGGAACTTGGT
CAAAAAAATGTTAAATTAAAACAGTCCTGGTCCAAAACATTGAGGAAATC
TGGGACACCATGAAAAGACCAAATGCAAAACTAATAGGAATAGAGAAAGA
CGAGGAAACCTAGGTCAAAGACACAGTAAATATTTGCAAGAAAATCATAG
AAGAAAAATTTTGTTACCTAAAGCAGATGCCTGTGAAGGAACAGAAAACA
TACAGAATATCAAATGGACTAGACTAAAATGAAAATAAATTCCCCCTGAT
ACATAATAATCAAAACACTACATGTGCAGAACATGGAAAAAATATTCAAG
GCAATAAGGAAAAAAGACCAAGTAACATAGAAAGGCAGACCTATTAAACT
TATACCTGACTCCAACATGGAGACTCTAAAAGCCAGAAGGACCTGGATGG
ATGTGCTGCTGAGTTTAAGTGACCACAGATGGCATCCCATATTATTN

Query= MSMg01no527_g08.b1 MSMg01no527_g08.b1 CHROMAT_FILE:
MSMg01no527_g08.b1 PHD_FILE: MSMg01no527_g08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:37 2005
         (668 letters)



>mm_chr5_40424459_40425526
          Length = 1068

 Score = 1245 bits (644), Expect = 0.0
 Identities = 659/664 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctctatgacaattttaacaacagattcctttatacaaaatgacaattatctgtaa 64
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 gaattctctatgagaattttaacaacagattcctttatacaaaatgacaattatctgtaa 809

                                                                       
Query: 65  caatcagctcaagaaaaataggggctttatttcagttgccagatagtaacacagattaga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 caatcagctcaagaaaaataggggctttatttcagttgccagatagtaacacagattaga 749

                                                                       
Query: 125 cctgttctctacacattagtggaacagcttattcgttcatgctggctttgcttccataca 184
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 748 cctgttctctacacattagtggaagagcttattcgttcatgctggctttgcttccataca 689

                                                                       
Query: 185 aaaggaggtcagagcatgtctgccatctggcctctactaaaagctttcaaaagtgacctg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 aaaggaggtcagagcatgtctgccatctggcctctactaaaagctttcaaaagtgacctg 629

                                                                       
Query: 245 tcaaaaggtggagctgctaagtggaaaggatcagttcttcagaattcacaagtgcactga 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tcaaaaggtggagctgctaagtggaaaggatcagttcttcagaattcacaagtgcactga 569

                                                                       
Query: 305 aatagcattcaacctattgtgacagtaaatgatagataaagaaacccgaaattgtaaata 364
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 568 aatagcattcaacctattgtgacagtaaatgatagatagagaaacccgaaattgtaaata 509

                                                                       
Query: 365 atagacatgtactatctgagtgtcttttgaaatcatcccatgtaactcctaaagctaatt 424
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 508 atagacatgtactatctgagtgtcttttgaaatcatcccatgcaactcctaaagctaatt 449

                                                                       
Query: 425 gtaaagaggtggaaaccactcctatggcaacatgaatgacagacccaaagaatactgaga 484
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 448 gtaaagaggtggaaaccactcctacggcaacatgaatgacagacccaaagaatactgaga 389

                                                                       
Query: 485 agatctaacctagatctagggttaggctccatgacaagggactgtaaattttctattaag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 agatctaacctagatctagggttaggctccatgacaagggactgtaaattttctattaag 329

                                                                       
Query: 545 ttacaagtttccttcaaagtgaatgggctctattactacttaaaacaaggcaaacaaaat 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttacaagtttccttcaaagtgaatgggctctattactacttaaaacaaggcaaacaaaat 269

                                                                       
Query: 605 aaagctctgccatcttctatcttgccacctttctgggaatatggattatgcatcttcttg 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aaagctctgccatcttctatcttgccacctttctgggaatatggattatgcatcttcttg 209

               
Query: 665 gtgc 668
           ||||
Sbjct: 208 gtgc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space:   696164
Effective search space used:   696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)