NCCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCACCTGAGGAATACCGAATGGCAGAGAAGAACCTGAAAAATGTT
CAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTC
CACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAG
ATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGG
ATTGCAGGCTTGTACAACCACGTCTGGCGGTTCCTCAGAAAATTGGACAT
AGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAG
ATGTCCCAACCGGTAAGAAGGATACATGCTCCATTATGTTCATAGCAGCC
TTATTTATAATAGCCAAAAGCTGGAAAGAACCCAGATGCCCCTCAACAGA
GGAATGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTACTCAG
CTATTTAAAAGGATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTG
GAGGGCATCATCCTGAGTGAGGTAACACAATCACAAAGGAACTCACACAA
TATGCACTCCCTGATAAGTGGATATTAGCCCAAAACTTAGAATACCCAAG
ATATAAGATACAATTAGCTAAACGCATGAAACTCAAGAAGAATGAAGACC
AAAGTGTGGACACTGTGCCCCTTCTTAGAATTGGGAACAAAACACCCATG
GAAGGAGTTACAAAGTTTGGAGC

CCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGTTCCCTCTTCACTCACTGTTGC
TTTCTGTTATAGAATAGATAATCCATTAATTGTAAGACAGCATCATCATA
AATAACAAAACCTTTGAAAATTCTTTCATTACTTTCTAATGAGTCATTCA
AAGGAACTATCTTGCTATCTCCAAATGTATAATAGTTATTTGAGGAAATT
AAAATTCTTTTCAGAAGAGCGTTAATAGTTTCTTTTTCCAAGAAGAAAAG
CCTATGAAGTAGCATGGGTGTGAAGTGATCGAATGCTCAAAGGCCAAATG
GCATATTATGTGGGGTATTCTGGAATATGGCTGCCACTTAGTGGCCCTCA
TCATGGCCCATCTCTTCAGAGTATGTACAAAGCTCTAGGAAATTGTATTC
ATTCGATGAATATAACCATAGAAGTTACTGCTCATGAATCAAAGGCTATC
AGAAAAACAATAAATAAATCAAAATTGTCTTTGAAGCACAGAAAACTCTG
CTTTAAAGTATCTCCTGTAAGCCTACCAGAAACTTGGTCTCATTCCATAT
TTCATGATTCCTTTCTTCTACAACTTCTACCTTTTACAGACTTACTGCTC
AGTTATATATACTTGAGCAGAATATAAAGCAGGTCCAACGTGTGTTGGTA
ATAGGGTTGGACTGCCGCCTTATTACATGTGGTATTGATGGTTCACAATT
CCAAACATTAGTAGGTTCAAGG

Query= MSMg01no527_p17.g1 MSMg01no527_p17.g1 CHROMAT_FILE:
MSMg01no527_p17.g1 PHD_FILE: MSMg01no527_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:27 2005
         (652 letters)



>mm_chr5_13373901_13374952
          Length = 1052

 Score = 1245 bits (644), Expect = 0.0
 Identities = 650/652 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgttccctcttcactcactgttgctttctgttatagaatagataatccattaattgtaag 60
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 201 tgttccctcttcactcactgttgctttctgttatagaataaataatccattaattataag 260

                                                                       
Query: 61  acagcatcatcataaataacaaaacctttgaaaattctttcattactttctaatgagtca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagcatcatcataaataacaaaacctttgaaaattctttcattactttctaatgagtca 320

                                                                       
Query: 121 ttcaaaggaactatcttgctatctccaaatgtataatagttatttgaggaaattaaaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcaaaggaactatcttgctatctccaaatgtataatagttatttgaggaaattaaaatt 380

                                                                       
Query: 181 cttttcagaagagcgttaatagtttctttttccaagaagaaaagcctatgaagtagcatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttttcagaagagcgttaatagtttctttttccaagaagaaaagcctatgaagtagcatg 440

                                                                       
Query: 241 ggtgtgaagtgatcgaatgctcaaaggccaaatggcatattatgtggggtattctggaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtgtgaagtgatcgaatgctcaaaggccaaatggcatattatgtggggtattctggaat 500

                                                                       
Query: 301 atggctgccacttagtggccctcatcatggcccatctcttcagagtatgtacaaagctct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atggctgccacttagtggccctcatcatggcccatctcttcagagtatgtacaaagctct 560

                                                                       
Query: 361 aggaaattgtattcattcgatgaatataaccatagaagttactgctcatgaatcaaaggc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggaaattgtattcattcgatgaatataaccatagaagttactgctcatgaatcaaaggc 620

                                                                       
Query: 421 tatcagaaaaacaataaataaatcaaaattgtctttgaagcacagaaaactctgctttaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatcagaaaaacaataaataaatcaaaattgtctttgaagcacagaaaactctgctttaa 680

                                                                       
Query: 481 agtatctcctgtaagcctaccagaaacttggtctcattccatatttcatgattcctttct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtatctcctgtaagcctaccagaaacttggtctcattccatatttcatgattcctttct 740

                                                                       
Query: 541 tctacaacttctaccttttacagacttactgctcagttatatatacttgagcagaatata 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctacaacttctaccttttacagacttactgctcagttatatatacttgagcagaatata 800

                                                               
Query: 601 aagcaggtccaacgtgtgttggtaatagggttggactgccgccttattacat 652
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aagcaggtccaacgtgtgttggtaatagggttggactgccgccttattacat 852


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space:   668964
Effective search space used:   668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)