Query= MSMg01no528_h12.b1 MSMg01no528_h12.b1 CHROMAT_FILE:
MSMg01no528_h12.b1 PHD_FILE: MSMg01no528_h12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:04 2005
(418 letters)
>mm_chr5_79931242_79932059
Length = 818
Score = 748 bits (387), Expect = 0.0
Identities = 402/409 (98%), Gaps = 4/409 (0%)
Strand = Plus / Plus
Query: 5 gaattctgatgatggtatcacatacttgatgtgatgaacttttagtaaaattaattcatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgatgatggtatcacatacttgatgtgatgaacttttagtaaaattaattcatg 264
Query: 65 aatttgtttattggtaaatagttatatgttaattagcagtttctcaaaaattatatactg 124
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 265 aatttgtttattggcaaatagttatatgttaattagcagtttatcaaaaattatatactg 324
Query: 125 tgcagtgtacatgattttttaaaattatttttattgttacttttagattcctaacatatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgcagtgtacatgattttttaaaattatttttattgttacttttagattcctaacatatt 384
Query: 185 taatggacattttcattcataccatctatcagacatagatagaataacatagctattgaa 244
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taatggacattttcattcacaccatctatcagacatagatagaataacatagctattgaa 444
Query: 245 attaaattaaatataaaaactacttttacatgtttaacatttcacttgttcaacttataa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attaaattaaatataaaaactacttttacatgtttaacatttcacttgttcaacttataa 504
Query: 305 gttgcatccatagcaagcaaaaaattaagtattcttttagtgtgtttagtttgtgtgtgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gttgcatccatagcaagcaaaaaattaagtattcttttagtgtgtttagtttgtgtgtgt 564
Query: 365 gtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgcatgtggggggg 413
|||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 565 gtgtgtgtgtgtgtgtgt----gtgtgtgtgtgtgtgcatgtggggggg 609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_h12.g1 MSMg01no528_h12.g1 CHROMAT_FILE:
MSMg01no528_h12.g1 PHD_FILE: MSMg01no528_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:04 2005
(629 letters)
>mm_chr5_79951351_79952379
Length = 1029
Score = 1081 bits (559), Expect = 0.0
Identities = 580/587 (98%), Gaps = 1/587 (0%)
Strand = Plus / Minus
Query: 42 gtgcacacatttcaccttcatggaaacttatatgtctaatcacaggtctatactcactgt 101
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 gtgcacacatttcaccttaatggaaacttatatgtctaatcacaggtctatactcactgt 970
Query: 102 gttgattttttttgaaaggaaactaaactttggctcttattcaatttctataatctttac 161
||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 969 gttga-tttttttgaaaggaaactaaactttggctcgtattcaatttctataatctttac 911
Query: 162 tttcaaagaatatctgtgtagcatttagtatttacaatttgatcttgcacagtcatggat 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 tttcaaagaatatctgtgtagcatttagtatttacaatttgatcttgcacagtcatggat 851
Query: 222 aaatcagataggcagttttgaaggattcatatgttattggtgacaactggaaccttgata 281
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 aaatcagaaaggcagttttgaaggattcatatgttattggtgacaactggaaccttgata 791
Query: 282 ggcatacggctaccaaaaaacgaaatcaggtatactgataaaaaggcaacattgcattga 341
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ggcatacggctaccaaaaaatgaaatcaggtatactgataaaaaggcaacattgcattga 731
Query: 342 tttagattatttatttttattaattttcttgaataagaattttatacacacatatgtttt 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tttagattatttatttttattaattttcttgaataagaattttatacacacatatgtttt 671
Query: 402 gatcacttatcttcatttacatcctgagtgtttgaaaccacaaccactccaccctgtaaa 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gatcacttatcttcatttacatcctgagtgtttgaaaccacaaccactccaccctgtaaa 611
Query: 462 caacatgggtatcccctgccctggtctccttttctctctctatctacttgatgatgtaag 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 caacatgggtatcccctgccctggtctccttttctctctctatctacttgatgatgtaag 551
Query: 522 tatatgcatgactgtaagaccatactgtggagcatggattcagtggtcacatccctcaac 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tatatgcatgactgtaagaccatactgtggagcatggattcagtggtcacatccctcaac 491
Query: 582 agaactgactatccctaacctagtacacatgaactgccaatggcttc 628
||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 490 agacctgactttccctaacctagtacacatgaactgccaatggcttc 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
