Query= MSMg01no528_k05.b1 MSMg01no528_k05.b1 CHROMAT_FILE:
MSMg01no528_k05.b1 PHD_FILE: MSMg01no528_k05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:17 2005
(678 letters)
>mm_chr5_115130896_115131972
Length = 1077
Score = 1214 bits (628), Expect = 0.0
Identities = 661/672 (98%), Gaps = 1/672 (0%)
Strand = Plus / Minus
Query: 5 gaattcctctcctggtacctgtttccttttgttttgggggtggttttaacagttggctgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 gaattcctctcctggtacctgtttccttttgttttgggggtggttttaacagttggctgt 816
Query: 65 ttgccttgcattttcctggtttctactggacccacaggcaaagcaagagaaaatagccat 124
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 815 ttgccttgcattttcctggtttctactggacccacaggcaaagcaggagaaaatagccat 756
Query: 125 caatgaccgagagatgcttttaaaaaaacatccaaagaaatcagatcccccgatgccgca 184
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 755 cgatgaccgagagatgcttttaaaaaaacatccaaagcaatcagatcccccgatgccgca 696
Query: 185 gtgagaggccgatgtgggccatctgaactccagccctctggaagggcagcaaatgccgtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 695 gtgagaggccgatgtgggccatctgaactccagccctctggaagggcagcaaatgccatt 636
Query: 245 agctgttcgctgtctccagcccctgtgctacattttaataaacgccatccagaatgctta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 agctgttcgctgtctccagcccctgtgctacattttaataaacgccatccagaatgctta 576
Query: 305 agccagcggctgatgtatctgtaagataacgtggttgatggaaaggtctccgtgctgtag 364
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 agccagcggctgatgtatccgtaagataacgtggttgatggaaaggtctccgtgctgtag 516
Query: 365 tttctcctctgtcactgagattaagcaacttttaaattcatctgtgaacttctcactcta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tttctcctctgtcactgagattaagcaacttttaaattcatctgtgaacttctcactcta 456
Query: 425 aagcccttttcttcttatcattctgtaaatgctctttacatattccgtgtatgatggtgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aagcccttttcttcttatcattctgtaaatgctctttacatattccgtgtatgatggtgg 396
Query: 485 cctgtatctattttctctgcttcctgccccacttggttgacagcctcttatgagaagttc 544
||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||
Sbjct: 395 cctgtatctattttctctgcttcctgccccactcagttgacggcctcttacgagaagttc 336
Query: 545 ttgggttttataactagatttgttgaccttatgtcttctgagttgagagaagaaaaaaaa 604
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 335 ttgggttttataactagatttgttggccttatgtcttctgagttgagagaagaaaaaaaa 276
Query: 605 aagccccttactaggcataaaagcctttcatcggcgttcagaaacacccaggctttcctg 664
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 a-gccccttactaggcataaaagcctttcatcggcgttcagaaacacccaggctttcctg 217
Query: 665 tctgcagcctgc 676
||||||||||||
Sbjct: 216 tctgcagcctgc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1077
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1067
Effective search space: 712756
Effective search space used: 712756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_k05.g1 MSMg01no528_k05.g1 CHROMAT_FILE:
MSMg01no528_k05.g1 PHD_FILE: MSMg01no528_k05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:17 2005
(628 letters)
>mm_chr5_114947791_114948818
Length = 1028
Score = 1077 bits (557), Expect = 0.0
Identities = 611/629 (97%), Gaps = 2/629 (0%)
Strand = Plus / Plus
Query: 1 ctcaggtgatgagaggtgtgctctgactgggggctctgatggtcagcta-aggtctgggg 59
|||||||| |||| ||||||||||||||||||||||| ||||||||| | ||||||||||
Sbjct: 201 ctcaggtggtgaggggtgtgctctgactgggggctcttatggtcagc-agaggtctgggg 259
Query: 60 gggggggtcactcgtggttttggttatggtttctattgctgtgaagagactccatgacca 119
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ggggcggtcactcgtggttttagttatggtttctattgctgtgaagagactccatgacca 319
Query: 120 cagcaactctttataaaggaaaacattttattgggactggcttacagttcagaagtttat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 320 cagcaactctttataaaggaaaacattttattgggactggcttacagttcagaggtttat 379
Query: 180 tccgtgactatcatggcgggaagcatggtggcacacaggcagatgtggtgctggagatgc 239
|| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 380 tctgtgactatcatggtgggaagcatggtggcacacaggcagacgtggtgctggagatgc 439
Query: 240 tgagagttctacatctggatcagcaggcggcaggaagagagaatgacactgggcctggct 299
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 440 tgagagttctacatctggatcagcaggcagcaggaagagagaatgacactgggcctggct 499
Query: 300 tgaacatttcaaacttcaaagccctacccctagtcacacacttcctgcaacaagaccaca 359
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 500 tgagcatttcaaacttcaaagccctacccctagttacacacttcctgcaacaagaccaca 559
Query: 360 cctcctaatagtgccactcctgtgagcccttggagtccatttccacccaaacaaccacac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 560 cctcctaatagtgccactcctgtgagcccttggagtccatttccacccaaacaaccatac 619
Query: 420 ttgtggtgtctaagcaagcctgctcacgtctgagctccaacttcctcatctgctgaacag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttgtggtgtctaagcaagcctgctcacgtctgagctccaacttcctcatctgctgaacag 679
Query: 480 tcacggtcaaggatgcatctcagagcctctgtgggatgctggaaatggcaaggctacaag 539
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 680 tcacggtcaaggatgcatctcagagcctctgcgggatgctggaaatggcaaggctacaag 739
Query: 540 ggagggagaaggctctctgggagccactgggctctgccacgcgtgggaagaatcctggaa 599
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 740 ggagggagaaggctctctgggagccaccgggctctgccatgcgtgggaagaatcctggaa 799
Query: 600 tgctgggccagtcagcaaggaggggttga 628
|||||||||||||||||||||||||||||
Sbjct: 800 tgctgggccagtcagcaaggaggggttga 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
