NCCACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAACAGAATGAGAATGTGTTCTGGAGAAGCTCGGCCGCTCC
TCAGGAAGCAAAGATGCACAGATGCGCCCTTGCATCCTGGATTTCTCTAC
TGAGCAGGATGAGGCGCCTCCCTAGATACGGGTAACTCGAGGAAGACTGG
TGTAGACTTGGAGTTAAAGAGTTAAAAAACAGGGAAGTCTACACTGAGTA
AAAAGACACTGTTGAGGTGGGCTCAGGAATGCCTTTGGAAGTCAGAGTTC
TGGGAAGTTAAATCTGCATTCTTTTCTGAAATGAAAAAAATCATGAATAA
ACAGGTGCTGAGTGGACCAGGGTCACGTGTTCTAAAAAGAGCAAAAGCTA
AGACTCGTGGGTAGTTATGATGACATGGGGAGTCCTCCAAGCTGAGATAA
ATAATCTCCCTTTAATCTAAAAATAACAGAGAATCACTGTAGACTTTTGA
GCAGGGAAGGAGGTGAAGTATCTAAGGGAATGGAATGGGGGAGGGAAATG
AGGTGAGGATCCACACTGGACTGGCAGAAAGCTCAGCACCTGGAGGGCAG
CTGAGACAATAACAAAGCAAGGATATGAGAGACAACTGGGTCCCCTTAAG
TCTTACTCTGTGAGCTGGGAGATGGGAAGAGAGCCAAGGGGAGCCATTTC
AGGGGAGAATCTGTAGAATTTGGCAGCTGTATGATGTGAGGAGTGCCAG

CCACTATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAGTTGAGAAAATGCTCCTGGCAG
ACTGGCCTGTGGTGCATGCTCTTGATTGATGACTGATGTGGGCAGACCCA
ACTCACTGTGGGCGGTGCCATCCCTGGGTTGTTGGAACTGGGTTCCATAA
GAAAGGAGGTTGAGCAAGCCAGTAAAAGCAGCTCTCCTCCATGGCCTCTG
CGTCAGCTCCTGCCTCCAGGTTCCTGTCCTGTTTGACTTTGTGCCTTCTT
TTCCCTCAATGGACCCTGACCCAGGATATATAAATCAAATAAACACTTCC
CTCACCAACATGCCTTTGGCCATTGTGATTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTGCCCAGACAGGGTTTTATTATGTAGCCTTGGCT
GGCCTTGAACTCACTCTGGAGATCAGGGTGGCCTAAAAATCAAAAATCTG
CTCTGCCCACTGAGTTCTGGGATAAAAGGTGTGTGTTACCAACAAACTGG
TCATGGTGGTTTATCACAGTAATAGAAATCTAAACTAAGACAGTTACTCC
CCTAATAAATTCCCGGCAGAAAAGAAAGGCCGGAAAGCCACTGAAGAAAG
ATATAAATTTCCCGCACATGATCCCCGTGACCCATGGCAAGTTCACCCTT
TTCTGGCTCACAGTGATGCTATCTTAATATGAAATCCCCCCGGGG

Query= MSMg01no528_n02.b1 MSMg01no528_n02.b1 CHROMAT_FILE:
MSMg01no528_n02.b1 PHD_FILE: MSMg01no528_n02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:32 2005
         (655 letters)



>mm_chr5_97143897_97144951
          Length = 1055

 Score = 1181 bits (611), Expect = 0.0
 Identities = 641/651 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaacagaatgagaatgtgttctggagaagctcggccgctcctcaggaagcaaaga 64
           ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 205 gaattcaacagaatgagaatgtgttctagagaagctccgccgctcctcaggaagcaaaga 264

                                                                       
Query: 65  tgcacagatgcgcccttgcatcctggatttctctactgagcaggatgaggcgcctcccta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcacagatgcgcccttgcatcctggatttctctactgagcaggatgaggcgcctcccta 324

                                                                       
Query: 125 gatacgggtaactcgaggaagactggtgtagacttggagttaaagagttaaaaaacaggg 184
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 325 gatacgggtaactcgaggaagactggcgtagacttggagttaaagagttaaaaaacaggg 384

                                                                       
Query: 185 aagtctacactgagtaaaaagacactgttgaggtgggctcaggaatgcctttggaagtca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagtctacactgagtaaaaagacactgttgaggtgggctcaggaatgcctttggaagtca 444

                                                                       
Query: 245 gagttctgggaagttaaatctgcattcttttctgaaatgaaaaaaatcatgaataaacag 304
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 445 gagttctgggaagttaaatctgcgttcttttctgaaatgaaaaaaaccatgaataaacag 504

                                                                       
Query: 305 gtgctgagtggaccagggtcacgtgttctaaaaagagcaaaagctaagactcgtgggtag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgctgagtggaccagggtcacgtgttctaaaaagagcaaaagctaagactcgtgggtag 564

                                                                       
Query: 365 ttatgatgacatggggagtcctccaagctgagataaataatctccctttaatctaaaaat 424
           ||||||  |||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 565 ttatgacaacatagggagtcctccaagctgagataaataatctcactttaatctaaaaat 624

                                                                       
Query: 425 aacagagaatcactgtagacttttgagcagggaaggaggtgaagtatctaagggaatgga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aacagagaatcactgtagacttttgagcagggaaggaggtgaagtatctaagggaatgga 684

                                                                       
Query: 485 atgggggagggaaatgaggtgaggatccacactggactggcagaaagctcagcacctgga 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atgggggagggaaatgaggtgaggatccacactggactggcagaaagctcagcacctgga 744

                                                                       
Query: 545 gggcagctgagacaataacaaagcaaggatatgagagacaactgggtccccttaagtctt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gggcagctgagacaataacaaagcaaggatatgagagacaactgggtccccttaagtctt 804

                                                              
Query: 605 actctgtgagctgggagatgggaagagagccaaggggagccatttcagggg 655
           |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 805 actctgtgagctgggagatgggaagagagccaaggggagccatttctgggg 855


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space:   674025
Effective search space used:   674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)