Query= MSMg01no529_n24.b1 MSMg01no529_n24.b1 CHROMAT_FILE:
MSMg01no529_n24.b1 PHD_FILE: MSMg01no529_n24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:00 2005
(633 letters)
>mm_chr5_57318570_57319601
Length = 1032
Score = 884 bits (457), Expect = 0.0
Identities = 469/473 (99%), Gaps = 1/473 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagcatgcctgatttgattcacatattcatgcttcttggtcttcatagatgttg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ggaattcagcatgcctgatttgattcacatattcatgcttcttggtcttcatagatgttg 413
Query: 64 tgtgctacaaaattgattttcccattttttttcctctgtggttcactttgctatgtaaca 123
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 412 tgtgctacaaaattgattttccca-tttttttcctctgtggttcactttgctatgtaaca 354
Query: 124 tactgtaatctttaaaattatctttcatattttcaattacaatatatttacatcatccct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tactgtaatctttaaaattatctttcatattttcaattacaatatatttacatcatccct 294
Query: 184 gactccttcccacaagacctaccatacacccttccttgtagtctttcatgttaacagtct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gactccttcccacaagacctaccatacacccttccttgtagtctttcatgttaacagtct 234
Query: 244 cttttttctttccttcactgctgatgaatgccatttgtataaattttctaatatatatat 303
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 233 cttttttctttccttcactgctgatgaatggcatctgtataaattttctaatatatatat 174
Query: 304 attctctacaaagcattatgtattagataatctatatttttgctattctctgtgaaaact 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 tttctctacaaagcattatgtattagataatctatatttttgctattctctgtgaaaact 114
Query: 364 attactactgaactcagcattctttaattagctatcttgctttaagtgtgaacttgtttg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 attactactgaactcagcattctttaattagctatcttgctttaagtgtgaacttgtttg 54
Query: 424 tgagcttcccccaatctactgtagcatgccttttggcttttgattaaaacatt 476
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 tgagcttcccccaatctactgtagcatgccttttggcttttgattaaaacatt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1032
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1022
Effective search space: 636706
Effective search space used: 636706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_n24.g1 MSMg01no529_n24.g1 CHROMAT_FILE:
MSMg01no529_n24.g1 PHD_FILE: MSMg01no529_n24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:00 2005
(616 letters)
>mm_chr5_57154938_57155953
Length = 1016
Score = 698 bits (361), Expect = 0.0
Identities = 385/393 (97%)
Strand = Plus / Plus
Query: 224 gttgaccttgaaattgctctgtggtccaggtaaaccttgaactcaaggtccctcactcgt 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gttgaccttgaaattgctctgtggtccaggtaaaccttgaactcaaggtccctcactcgt 483
Query: 284 ctttcctggtatctgtacatacagttctgtgccatgaagctcagtctagcttaatttatt 343
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ctttgctggtatctgtacatacagttctgtgccatgaagctcagtctagcttaatttatt 543
Query: 344 ttaacattcgttgagttattgctaaggaatttaaattttcctataaagtatttatataag 403
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 544 ttaacattcgttgagttattgctaaggaatttaaattttcctataaagtatttatatagg 603
Query: 404 aatatttcctatgtggagtctaaaatataagtaatttcaatttatttatttgatttaaat 463
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 604 aataattcctatgtggagtctaaaatataagtaatttcaatttatttacttgatttaaat 663
Query: 464 atagaaattgctctatgccatttgatctttgattatataatgtaaacacctcatcattgc 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 atagaaattgctctatgccatttgatctttgattatataatgtaaacacctcatcattgc 723
Query: 524 ccaaatatcctaccctaacagaatgaaatggaataaaaatatctgagtaacactggaagt 583
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 724 ccaaatatcctaccctaacagaatgaaatggaataaaaatatccgagcaacactggaagt 783
Query: 584 gactcattaattttaaatattagatataagagg 616
|||||| ||||||||||||| ||||||||||||
Sbjct: 784 gactcagtaattttaaatatcagatataagagg 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
