TCAAATTTGCNCCCTATACACTCCTTATTCGGAGAGCGGGTTGGGGTGGG
GGGTCGGGGTTGGCGGGGGTGGGTGGGGGGTGAGCCACCTNNCANNNACT
TATGCTCCTGGACATTACTTGGTTATTCTNCATTTATTATTTNNCTCTNA
CTATTTNNAAAACCATTNAACCTGGNNAAAAANNNCCAACACAAAAAAAC
CTCCCTTTTATTAGGGGGGNCCAANNTTTAANNCTTTTCCAATAACCCTT
TTCCTTTCCCCCCACTTTTTTTCCCAATTTAACCCTTTCCAACAAAAAAC
AAAACTTTTTAAAAAAACCTCCCAAAAAAAAAAAAAACCCCTTTTTTTGG
GGNTTTTTTTCTTTTTTATAAAAAAAAACTTTCTCTTTTTTTTTTTTTTT
TTAAAAAAACCCCCCCCCCCCNAAAAAAAAAAATTTTTTTTTTAACCCCC
TCTTTTTTTTCTCCCCCCTTTGGGTTTTTTTTTTTTTTTTTCTTCTCCCN
NNACCCCCCCCCCCCAAAAAAAAAAAAAACCAACCCACCCGGGGGGGGTT
TTTTTATNTTTTTATATNNNNNNNNNNACACACACCACCCCCCCCCCCCC
NNCTCTTTTTTTTGTTTTTTNTTCTCCTTCCCCCTCTCTTTTCTTTTTTT
CTCCCCCTCCGGGANNAAAAAAAAAAANAANAAAAAAAAAAAAACAAAAA
CAACATCGCGCTCTTTTCTCCNNTTTCCTTTTTNTTCTCCCCCCCCCCCC
CCCCCCCTCACNTAATATAATACGAATCGGGTGAGTGGGG

NTTTTTCAATGCAGTGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGTAAATATAGGCCTCTGT
ATCCTCATTTGTTTTTAATACTTATGATCTGAAAATATGTATGCATATGT
GCTGGAATCTGTCTTAATTTCAAGCTCATCTATTCCTGCAATCTTCCTGC
AGAAAACAGAATTGAAGATCATGTTCCTTAGGAACATAGTCATTGGTAGT
GTAAATTTAACATCCCTTATCTGTGTTTACATTTCAGTTTTCACCCTTGA
ACCCTGTTTTGCTCACCTCATCCTTACTTGGCACAGTCATCATCATTTCT
ATATCAAAAACAAAAACAAAACAAAAAACTCACCAATGACACAAATACAA
ACAAAAGTTTGGGATCCATGTGTCTCTATCATGTCCAGTTTAAATAAGTT
GACAAGGGTCCAATTAAGTTATTTTTATACTTGCATCCTGAGGATTGAGA
AACATGGGTGTACAAGTAACTAACACTGACCCTTAAGTTCTCAGCCCTCT
TCAGAGAATTTTTTTTCTCACAAAAATGGTAATTAATACAGACTCCCAAC
TACTAAACATGTAGAAAATATGAGACTATGGTGTGCTGAGATTTAAATGA
GACAATTACAGCATAGCCCCTCCCTCCAAGGGTGGAGATGATCACATAAA
AGTGAGAAGAAAAACTGTAAAAGCTAGAAGCAGAGCCCAAATCAGTAAAA
CTGCTAGGGACAGGGCTGTCACACAAATGAACTCA

Query= MSMg01no530_j24.g1 MSMg01no530_j24.g1 CHROMAT_FILE:
MSMg01no530_j24.g1 PHD_FILE: MSMg01no530_j24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:01 2005
         (554 letters)



>mm_chr5_6291426_6292379
          Length = 954

 Score =  870 bits (450), Expect = 0.0
 Identities = 468/474 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgtaaatataggcctctgtatcctcatttgtttttaatacttatgatctgaaaatatgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ttgtaaatataggcctctgtatcctcatttgtttttaatacttatgatctgaaaatatgt 415

                                                                       
Query: 61  atgcatatgtgctggaatctgtcttaatttcaagctcatctattcctgcaatcttcctgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 atgcatatgtgctggaatctgtcttaatttcaagctcatctattcctgcaatcttcctgc 355

                                                                       
Query: 121 agaaaacagaattgaagatcatgttccttaggaacatagtcattggtagtgtaaatttaa 180
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 354 agaaaacagaattgaagatcatgttccttagggacatagtcattggtagtgtaaatttaa 295

                                                                       
Query: 181 catcccttatctgtgtttacatttcagttttcacccttgaaccctgttttgctcacctca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 catcccttatctgtgtttacatttcagttttcacccttgaaccctgttttgctcacctca 235

                                                                       
Query: 241 tccttacttggcacagtcatcatcatttctatatcaaaaacaaaaacaaaacaaaaaact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tccttacttggcacagtcatcatcatttctatatcaaaaacaaaaacaaaacaaaaaact 175

                                                                       
Query: 301 caccaatgacacaaatacaaacaaaagtttgggatccatgtgtctctatcatgtccagtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 caccaatgacacaaatacaaacaaaagtttgggatccatgtgtctctatcatgtccagtt 115

                                                                       
Query: 361 taaataagttgacaagggtccaattaagttatttttatacttgcatcctgaggattgaga 420
           |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 114 taaataagttgaaaagggtccagttaagttatttttatacttgcatcctgaggattgaga 55

                                                                 
Query: 421 aacatgggtgtacaagtaactaacactgacccttaagttctcagccctcttcag 474
           ||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 54  aacatgggtgtgcaagtaagtaacactaacccttaagttctcagccctcttcag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space:   513536
Effective search space used:   513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)