NNNNNNNNNNNNNNNNNNTTTTNNNNNNNTTTTTTTNNNTTTTNNNNNNN
NNNNNNNNNNNNNNNTTNTTNNNNNNNNNNNNNNNNTTTTNNNNNNNNNN
NNNTTNNNNNNNNNNNNTTTNNNNNNNNNNNNNNNNNNNTTTTTTNNNNN
NNNNTTNNTNNNNNNNNNTNNNNTNTTNTTNNNNAGGGTTGNNTNAGGTT
NNNNNGNNNNNNAGGNNGGGCCTCTCTTTNNTTTNNNNNNNNNCCCTCCT
TAATAAAATTTTGCCCGGNCCCGCCTTAAAATTACGNAACTCACTATAGT
TCCAGNTCCGCGGNATTCTGCACTAATCCATCTGGTCCTGGGCTTTATTT
GGTTGGGAGACTTTTATGACTACTATTCTTTAGAGTATGGACGTTAGATG
TTTAGCTGATCCTGATTACTTTATTTTGCATCTTCTGAAAATTCCCTTTT
CATCAGTTTTCCATTTTTTTTAATATAGCTTCTGAAAAAAATCCGAAAAT
GGGGGGTTTTTTTTTTAATTTCCCCCATTTCCCGTTTTATTCCCCCCCTT
TTCTTTTTCAAATTTTTAAATTTTTGATTTTTTCCCCCGGCCCCCCCTGT
TGTAACCCCCCCAAAAGGGTTCACCCCCCCCCCCGGAATTTTCCCCCAAA
AAAAAACCCCCCCCCGGTTGGGGGGAAATTCCTTTAAAAAAAT

NGGTGGCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTTATAAATATTAATC
TTTAATGGAGATTGGAGGCTTGAGTCTTACAAAAAGAACAACTATTCTTT
AATTCTTTAATAACATCCTGATCAGACTCTTTTGGTATTTCCATCTACCT
CTTATCCATGCATCAGAATTTTTCCATTATAAATATTTTTTCAAATATTT
TTAGTTTTTCAAGATGTTGAAGGATAGTCCTGTTGGTCAAAAAAAAAAAA
GTATTGTTGGTTTTCTATAACAGATTATCATTGTTTTAAAATCAGAAAAT
ATATTTTATGATAATCTCATTGTGTTTACTTGAAGTGTTTTATCTTTTGT
TTTTAAATACTTAAGTAAAACCATAATCAGAATATAATCTATCAAAAATC
TATTTTTAATAAAATACAAAAAGAAACAAACAACAACGATAAACTTTTAT
GCAATTTTTACCAGGTTGTAATGTAGAGTGTGAGGAAAACTGAATCCAAG
TACCTGGGTCAAACTGACACCAATTTGACTCTCAAAATAAACCATCTCAT
TTTTCCTTAAAAATTGATAAAATAAAATATACTAAAGTATAGTGCGAGGA
CTATGTTGGGTGCAACATGTTTACAGTTAAGGAACTAATGCTATTTTATT
TCACCTGACCTTTCCATAAGCCACTGGGGAACGGTAAATTCCTCATTGAA
GTCTT

Query= MSMg01no532_j05.g1 MSMg01no532_j05.g1 CHROMAT_FILE:
MSMg01no532_j05.g1 PHD_FILE: MSMg01no532_j05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:32 2005
         (646 letters)



>mm_chr5_82665731_82666777
          Length = 1047

 Score = 1236 bits (639), Expect = 0.0
 Identities = 645/647 (99%), Gaps = 1/647 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   acttataaatattaatctttaatggagattggaggcttgagtcttacaaaaagaacaact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttataaatattaatctttaatggagattggaggcttgagtcttacaaaaagaacaact 260

                                                                       
Query: 61  attctttaattctttaataacatcctgatcagactcttttggtatttccatctacctctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attctttaattctttaataacatcctgatcagactcttttggtatttccatctacctctt 320

                                                                       
Query: 121 atccatgcatcagaatttttccattataaatattttttcaaatatttttagtttttcaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atccatgcatcagaatttttccattataaatattttttcaaatatttttagtttttcaag 380

                                                                       
Query: 181 atgttgaaggatagtcctgttggtcaaaaaaaaaaaa-gtattgttggttttctataaca 239
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 atgttgaaggatagtcctgttggtcaaaaaaaaaaaaagtattgttggttttctataaca 440

                                                                       
Query: 240 gattatcattgttttaaaatcagaaaatatattttatgataatctcattgtgtttacttg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gattatcattgttttaaaatcagaaaatatattttatgataatctcattgtgtttacttg 500

                                                                       
Query: 300 aagtgttttatcttttgtttttaaatacttaagtaaaaccataatcagaatataatctat 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagtgttttatcttttgtttttaaatacttaagtaaaaccataatcagaatataatctat 560

                                                                       
Query: 360 caaaaatctatttttaataaaatacaaaaagaaacaaacaacaacgataaacttttatgc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaaaatctatttttaataaaatacaaaaagaaacaaacaacaacgataaacttttatgc 620

                                                                       
Query: 420 aatttttaccaggttgtaatgtagagtgtgaggaaaactgaatccaagtacctgggtcaa 479
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 621 aatttttaccaggttgtaatgtagagtttgaggaaaactgaatccaagtacctgggtcaa 680

                                                                       
Query: 480 actgacaccaatttgactctcaaaataaaccatctcatttttccttaaaaattgataaaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 actgacaccaatttgactctcaaaataaaccatctcatttttccttaaaaattgataaaa 740

                                                                       
Query: 540 taaaatatactaaagtatagtgcgaggactatgttgggtgcaacatgtttacagttaagg 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taaaatatactaaagtatagtgcgaggactatgttgggtgcaacatgtttacagttaagg 800

                                                          
Query: 600 aactaatgctattttatttcacctgacctttccataagccactgggg 646
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aactaatgctattttatttcacctgacctttccataagccactgggg 847


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1047
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1037
Effective search space:   659532
Effective search space used:   659532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)