ACTTTTTATCTTCCCATATTTGCGGCCCTAATTTACTCCTATATTTTGAG
GATCCGCGGAATTCCTATACAATTTGGCCTCAAACTCACAAACCTGCCTG
CCTCTACCTCCCAAGTACTGGGATTAAAGGCCTGTGCCACTGCACCCAGC
AAATTTTGTTCTTTTCAATTTTCAGTGTTACTTGTTTGTTTTTCCTTTCT
TTGTTTCTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTTTTG
GTTTGTTGAGACAGGGTTTCTCTCTCTGTGTAGCCTTGGCTTTCCTGGTA
CTCACTCTGCCCTGATCTCACATAGATCCACCTTGTCTCTGCTTTCTGGT
TGCTAGGATTAAAGACATGAGCTGCCACCACCCATCCCGTCACTTGTTTC
TAATATAGGTTTTTCAAAAGTCATCACTGCATGAAATACTATTTATATCC
CGGCGCGCATTCTACATAGCAATAACATAATAAGTCACTGTACTTCAAGT
ATTTACAACATAAGTGTTTGATTGCTTTTATCATTGAAAAACGGTAGATA
CTATTGCACAATTGTTTATCCCCGATTTTAATGTTACTTCATCATCAGGT
TACAACTATCATATCACATTTTCACACCTTTATATGCATACTAATCTCTC
GGTCCTCCTCTATTTACCTCTCTTCAATTTTTCTTTACCTTCACCGCCGC
CTTATACCTCTATTTCCACACATACGCTTTGCC

NCCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTGTGAGCCGATTTGGGGATCCTC
TACTGAACCAGTTTGGGGTTCTATTTGAACTATCTGAAGAGAAAGTTTGG
TTTATTTGTGCTTTGTGCTATTTTTGCCAATCCAAGTTGTACAGGGCACA
GGGAAGCTGGCAGATTTAGAGAGTTCTCTGTTATTGGCATGAGAAAGGGA
AACCCTAATTCTACTTTGGGGTTCCCTAGAGAAATCATGATAAGCCCTGA
AGCATGCTATGTGTCTGAGATATTGCATTTCTCCTATGGGATGCAACTGC
TTTCTAGAAGTATCTGGATTCGATAATCACAGACTTCTTTTACTTTTTGA
CTCAGAGCTTAAGTTGTTGTTGTTGTTGTTTTTAACTGATAGATTCACCT
TTTTAGGTCTGCACACTGTTTCCTTATTTATAAATATGAGATGTAGTTAG
CATATTTTATCTACATTAACATTTGATGTATGCATTTGTTTTGTGAGATT
GGAACTTTTGGCTTCCTATCTGGTTTTTTTTTTTTTCTAAGAAAATCTGT
ATTCACTTGGAACCTATTACTCAGCCAGGCTGGAATTAAAGCATCCAAAG
AACTGACTCAGTCTGTTTGGGACTGAAAAAAAAAGTAAGATAAAAGTTTT
GGAGTTTTCAATAAAAAGTAACAATACAAAAAA

Query= MSMg01no533_i08.g1 MSMg01no533_i08.g1 CHROMAT_FILE:
MSMg01no533_i08.g1 PHD_FILE: MSMg01no533_i08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:45 2005
         (643 letters)



>mm_chr5_30142185_30143228
          Length = 1044

 Score = 1230 bits (636), Expect = 0.0
 Identities = 642/644 (99%), Gaps = 1/644 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgtgagccgatttggggatcctctactgaaccagtttggggttctatttgaactatctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 ctgtgagccgatttggggatcctctactgaaccagtttggggttctatttgaactatctg 785

                                                                       
Query: 61  aagagaaagtttggtttatttgtgctttgtgctatttttgccaatccaagttgtacaggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 aagagaaagtttggtttatttgtgctttgtgctatttttgccaatccaagttgtacaggg 725

                                                                       
Query: 121 cacagggaagctggcagatttagagagttctctgttattggcatgagaaagggaaaccct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 cacagggaagctggcagatttagagagttctctgttattggcatgagaaagggaaaccct 665

                                                                       
Query: 181 aattctactttggggttccctagagaaatcatgataagccctgaagcatgctatgtgtct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 aattctactttggggttccctagagaaatcatgataagccctgaagcatgctatgtgtct 605

                                                                       
Query: 241 gagatattgcatttctcctatgggatgcaactgctttctagaagtatctggattcgataa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 gagatattgcatttctcctatgggatgcaactgctttctagaagtatctggattcgataa 545

                                                                       
Query: 301 tcacagacttcttttactttttgactcagagcttaagttgttgttgttgttgtttttaac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tcacagacttcttttactttttgactcagagcttaagttgttgttgttgttgtttttaac 485

                                                                       
Query: 361 tgatagattcacctttttaggtctgcacactgtttccttatttataaatatgagatgtag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tgatagattcacctttttaggtctgcacactgtttccttatttataaatatgagatgtag 425

                                                                       
Query: 421 ttagcatattttatctacattaacatttgatgtatgcatttgttttgtgagattggaact 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ttagcatattttatctacattaacatttgatgtatgcatttgttttgtgagattggaact 365

                                                                       
Query: 481 tttggcttcctatctggttttttttttttt-ctaagaaaatctgtattcacttggaacct 539
           |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 364 tttggcttcctatctgtttttttttttttttctaagaaaatctgtattcacttggaacct 305

                                                                       
Query: 540 attactcagccaggctggaattaaagcatccaaagaactgactcagtctgtttgggactg 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 attactcagccaggctggaattaaagcatccaaagaactgactcagtctgtttgggactg 245

                                                       
Query: 600 aaaaaaaaagtaagataaaagttttggagttttcaataaaaagt 643
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aaaaaaaaagtaagataaaagttttggagttttcaataaaaagt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1044
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1034
Effective search space:   654522
Effective search space used:   654522
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)