CAAATTTGGGCCAATAGATCATTCGGAAGATCGGGAATAAGATAAAACAT
GCTTCTCGCTCCTTTTCTGCATAATCCTGATAATTCCTTCACCGGTTTTA
CCCTCATGCCATTTTTATGTAATAATAATAATTTCCTTTTTCTCCCTGTC
TTTGTCTCTGTCTATCTCTGTCTCTCTCTGTTTCTCTCTGCCTCTGTTTC
TCTTCCTCACTGCTTAAGAGTTTTTATTAATAAATCAATTTGTAACATTA
TAAAATGTCTTGGGGGACATGTTGGGTTTCTAAAGGGCNNAAAANGTAAA
AAATTAGGACCCTTTAAAGAGGTTTTTTCCTCTTTTAAAANNCACAACAG
CCCCCCATGTATATTCGCTTCTCTATTGTGTATGATGTTATTTTTTNNNA
TGAGATNAAATCCCCTCCCCCCTTATNCCCTTCAATNTTTATCNNTCTAN
CNNNAAAAAAANAAAAGCGCCCCCCCCACAATATTTTTTAAAAAAAAAAA
AAACAACCTCCTCGAGCTCCACTTCNAAGAAAAAAACTCCCTACAAGGAA
ACAAAAAGCNTATTTTATATTTATNTAAACTGTCAACCCCCTCCCTTT

ATTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTGAAGGCACGAGGCATGCTTTAATA
AAAAATACATGTCAAGGGTATCAGTGATAATTATCAGAATTAGCAATGGA
AAGAACATCTTCTGAATGATTTGACTTAAAACATTATTGCTGACTCCTTA
AAAATGGATACTTGATGTTAAAATATGAAAGAGTGCCTCTTCTCCTTGAT
AATTTTTGTGCTAATGCCTGTCATACTCTCAAGGCAGTCAACTGACTGGA
AGTATTTGAAAATCACTAATCTGAATTCTTTTCACCTACCTAGTAAGTAC
AATGAAACCTTCGAGTACCTTTAATGTTTTTTTTTAATAATAAGGTAATT
TGAAGTTTTGCACTAACATTTGTTTTGAAGGTGTTAAGAGAATATATCCT
ATTTAACAACCCAAAATATCCTACAGTTATTGTTTATACTCTCGCCTCCT
AATATGGTCTCTTCACACAACAGTTTTGAAGTATTTCAGGCATGTTATCT
TGTAACTCTGCCTGAGTCCAAAAGCACATTTAGGAACAGTGCTTGCTTAT
TTTAGATAAGTAAATTCCTGGTCATTCATCACCTCTCACATTGACAATGT
CCCCATGCCTGGGACAGGATGGGCTGGCAGAAGTTTGCAAAGTTATAGCG
GGAGATATACAGCGGAGCTACATGT

Query= MSMg01no534_b12.g1 MSMg01no534_b12.g1 CHROMAT_FILE:
MSMg01no534_b12.g1 PHD_FILE: MSMg01no534_b12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:28 2005
         (647 letters)



>mm_chr5_58473759_58474806
          Length = 1048

 Score = 1214 bits (628), Expect = 0.0
 Identities = 643/648 (99%), Gaps = 1/648 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgaaggcacgaggcatgctttaataaaaaatacatgtcaagggtatcagtgataattat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgaaggcacgaggcatgctttaataaaaaatacatgtcaagggtatcagtgataattat 260

                                                                       
Query: 61  cagaattagcaatggaaagaacatcttctgaatgatttgacttaaaacattattgctgac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagaattagcaatggaaagaacatcttctgaatgatttgacttaaaacattattgctgac 320

                                                                       
Query: 121 tccttaaaaatggatacttgatgttaaaatatgaaagagtgcctcttctccttgataatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccttaaaaatggatacttgatgttaaaatatgaaagagtgcctcttctccttgataatt 380

                                                                       
Query: 181 tttgtgctaatgcctgtcatactctcaaggcagtcaactgactggaagtatttgaaaatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgtgctaatgcctgtcatactctcaaggcagtcaactgactggaagtatttgaaaatc 440

                                                                       
Query: 241 actaatctgaattcttttcacctacctagtaagtacaatgaaaccttcgagtacctttaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actaatctgaattcttttcacctacctagtaagtacaatgaaaccttcgagtacctttaa 500

                                                                       
Query: 301 tgttttttttt-aataataaggtaatttgaagttttgcactaacatttgttttgaaggtg 359
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgttttttttttaataataaggtaatttgaagttttgcactaacatttgttttgaaggtg 560

                                                                       
Query: 360 ttaagagaatatatcctatttaacaacccaaaatatcctacagttattgtttatactctc 419
           |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 561 ttaagagaatatatcctatttaacaacccaaaatgtcctacagttattgtttattctctc 620

                                                                       
Query: 420 gcctcctaatatggtctcttcacacaacagttttgaagtatttcaggcatgttatcttgt 479
           |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 621 gcctcctaatatggtctcttcacacaatggttttgaagtatttcaggcatgttatcttgt 680

                                                                       
Query: 480 aactctgcctgagtccaaaagcacatttaggaacagtgcttgcttattttagataagtaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aactctgcctgagtccaaaagcacatttaggaacagtgcttgcttattttagataagtaa 740

                                                                       
Query: 540 attcctggtcattcatcacctctcacattgacaatgtccccatgcctgggacaggatggg 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attcctggtcattcatcacctctcacattgacaatgtccccatgcctgggacaggatggg 800

                                                           
Query: 600 ctggcagaagtttgcaaagttatagcgggagatatacagcggagctac 647
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctggcagaagtttgcaaagttatagcgggagatatacagcggagctac 848


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1048
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1038
Effective search space:   661206
Effective search space used:   661206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)