TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGAGAGAATATATATATATATACATCCATCCATACACACACACACA
CACACACACACACACACACACACACACACATATACATATTTTTTGGATAT
TAGTCCCCTATCTGATTTAGGATTGGTAGAGATCCTTTACCAATCTGTTG
GTGGCCATTTGATCTTTTTTTTTTTTTCTTTTTTTCAGAGACAAGGTTTC
TCTCTGTAGTCCTGGCTGTCCTGGCCTCACTCTGTAGACCTGACTGGCCT
CTATTCAGAATTTGCCTGCCTCTACCTTCCAAGAGCTGAGATTAAGGTGT
GGGCCACCACTGCCCGGTGGCCTTTTTGTCTTATGGACAGTGTCTTTTGC
CTTACAGAAGCTTTGCAATTTTATGAGGTCCCATTTGTCGAGTCTTGATC
TTACAGCACAAGCCATTGCTGTTTTCTTCAGGAATTTTCCCTCTGTGCCC
TTATCTTGAGGCTTTTCCCCACTTTCTCTTCTATAAGTTGCAGTGTTTCT
GGTTTTATGTGGAGTTTCTTGATCCACTTAGACTTGAGCTTTGTACAAGT
AGATAAGAATGGATCAATTCACATTCTTCTACATGATTACTGCCAGTTGT
GTCAGCACCATTTGTTGAGAATGCTGTCCTTTTTCCACTGGATGGTTTTA
GCTCCCTTGTCAAGATCAAGTGACCATAGGTGTGTGGGTGCCACGCACAC
TTCACTGAAGTCTGCTTGACANGCTTAAAAATCTGGAACACTC

CATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAACTTCAGCCCTCAAAACTACAATGCTA
ACTCTGCTGTGTAGCAGTGTGGAATTGGATGCAATGAGCCTGTTTTGGAT
CACTGCTTAACTGCTGAGGTCAATAAGACCTTGTTTGTGCATCTAGAGCT
TATGCATAAATCTAACAGCATAAACAGATTCTCTTGCCAATTTACATTCT
GAATACCAACTCTGCATTTACAAATTGTTTCTGTCTTCTGAAATAGGGTA
AGAAAAAGAACAATTCAACTGATTGCACATAGTGTCTCCCTAACAATTTT
CTTAAAAATATCAGGCCAGCTGTGTTTCATTTCAGAATTCCCTATCCTCA
GATCTGGGCATGATTGTGTGGTGTTCCGAATACAGAGGCACCCAAGAAAC
TCTAGGAAGAACGTAACAATATTCCCCTCCTCTAGCATACGTTTAAGAAT
TCACACTGAAATTGCTGTTGCAGAGCTCTTAAACAACTCAATGCCAATTT
CCTCTTCTTATTCTGGAAACACTGCATGTTAGTTAGAAAAGGGGGGAATT
CTAATTATGACAGTCTTTCTTACATGTGACTGCGTGATTTGTTTGCACCA
GACCCCTGATTCTCCAAAAGTCACAGCAAAGGCCAAAGCTTCAGTCTCAA
AGGGAGAAGAATGCTTTGGTGTGACACAGTTCTCTGTCACTNGAATAGTA
GAATTTACAGCGTGCCATTTTGAAGAGTGAATGGATTA

Query= MSMg01no535_j08.g1 MSMg01no535_j08.g1 CHROMAT_FILE:
MSMg01no535_j08.g1 PHD_FILE: MSMg01no535_j08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:26 2005
         (612 letters)



>mm_chr5_22335379_22336390
          Length = 1012

 Score = 1160 bits (600), Expect = 0.0
 Identities = 609/612 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aacttcagccctcaaaactacaatgctaactctgctgtgtagcagtgtggaattggatgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 aacttcagccctcaaaactacaatgctaactctgctgtgtagcagtgtggaattggatgc 753

                                                                       
Query: 61  aatgagcctgttttggatcactgcttaactgctgaggtcaataagaccttgtttgtgcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 aatgagcctgttttggatcactgcttaactgctgaggtcaataagaccttgtttgtgcat 693

                                                                       
Query: 121 ctagagcttatgcataaatctaacagcataaacagattctcttgccaatttacattctga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ctagagcttatgcataaatctaacagcataaacagattctcttgccaatttacattctga 633

                                                                       
Query: 181 ataccaactctgcatttacaaattgtttctgtcttctgaaatagggtaagaaaaagaaca 240
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 acaccaactctgcatttacaaattgtttctgtcttctgaaatagggtaagaaaaagaaca 573

                                                                       
Query: 241 attcaactgattgcacatagtgtctccctaacaattttcttaaaaatatcaggccagctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 attcaactgattgcacatagtgtctccctaacaattttcttaaaaatatcaggccagctg 513

                                                                       
Query: 301 tgtttcatttcagaattccctatcctcagatctgggcatgattgtgtggtgttccgaata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tgtttcatttcagaattccctatcctcagatctgggcatgattgtgtggtgttccgaata 453

                                                                       
Query: 361 cagaggcacccaagaaactctaggaagaacgtaacaatattcccctcctctagcatacgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 cagaggcacccaagaaactctaggaagaacgtaacaatattcccctcctctagcatacgt 393

                                                                       
Query: 421 ttaagaattcacactgaaattgctgttgcagagctcttaaacaactcaatgccaatttcc 480
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 392 ttaagaattcacactgaaattgctcttgcagagctcttaaacaactcaatgccaatttcc 333

                                                                       
Query: 481 tcttcttattctggaaacactgcatgttagttagaaaaggggggaattctaattatgaca 540
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 332 tcttcttattctggaaacactgcatgttagttagaaaaagggggaattctaattatgaca 273

                                                                       
Query: 541 gtctttcttacatgtgactgcgtgatttgtttgcaccagacccctgattctccaaaagtc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gtctttcttacatgtgactgcgtgatttgtttgcaccagacccctgattctccaaaagtc 213

                       
Query: 601 acagcaaaggcc 612
           ||||||||||||
Sbjct: 212 acagcaaaggcc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space:   603204
Effective search space used:   603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)