NAAAAATTGGTCCTCATGTCACTXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCACCAATGCTCATAAAGGCAACAAGGGCTGTCAGGAATATTT
GAAAACATCACAAACGTCTTTTCAAGAATTTGTCAATTCTCTCTCCCAAA
CATTTGACATTTTTCAGGAAGCTCCAAAGAGCTTTTAAAAATTAAAAAGA
ACCCCAGTGTGGATTTCAGCCTGGCTGAATCTCACAAACAGGACAGATTT
CCAGCAGTAGAAATAAAGCCTATCACACTGCCTGTGACCATGTCCAGGCT
GCCCTGCATGCAATGCTTCAACTTCTTTTCAAAGAGATTTCTATCAAAGT
TCAAAGGTCTTTTGCATCTAGGACATCTGGGCTCTAACCTCATTTCATCC
TTCCAAGGTAATTTTGTGTTCTCACCGTGTAACCTGCCAGGGGGTTTCAC
ATCACTTTACTGCTTGTGGGTTTTCTGTCCAAGATCAGTTTGTCTCCCAC
AGGGGAAAATATCTACACCTCATGTTTGGAAAGCCTGTTTTCCCCACCAA
TTATTTTATGTTCTTGTCTCCAAACTACTACTTGTTCAGTATATACATAC
ATACATACATACATACATACATACATACATACATACACACACACACACAC
ACAGACATATGGTACATGTAAATATGGTCATATTCTACATGAAATGAGTT
TGGGGTGAGTGCTTGTGTATGTGTGTTAGTGGCATGGATGTGCATGCACA
AGTGAACATGTATGTACACTTCTAGAAACCAGAGG

NAACCGATGATAGTGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAATACTGAAGATCCACT
GAGACGCCAGCCTTATAGACTGAACAACTGCTGGATTCTTAGACTCCCCA
TCAGTAAACAGACACTGTTGGTCTAGCTGGACTGCAGCCTATAAGCTACT
CTAATAATCATACATATCCATATATGTACACATACATATACACACATGTA
TACAAATTATATATGTGTGTGTGTGAATTATATTTTTATATATATATATA
TATATATATATATATATATATATATATATATATATATATATCTATCTCTC
TCACTCTGTCTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATG
TATGTGTGTATGTGTGTGTGTATAAGTGAGAGAGTGAGAGAGAGAGAGAG
TGAGAGTGAGAGAGTGTGGGGGGGGTGAGACAAGGTAACAGGGGCGCTGT
CTGTCGAAGAGGAGGGTGCGAGAGTGCGTGAGGCTTAGAATTTGCGGGTG
TGTATATATAGATATATATACAGATATATATGGACACGCGTGCGTGCGCG
AGTGACCCATGTTNTAGATATATTTTTATATNAAACATATATATAAANAT
ACATATTGCTGTTCAGGTTTTGGGATCTTTTTTTCTACATCCATGCATTT
GACTTTTTTGATAATAGAATGATTCCTACACACCTGAGATTTTTCCTGGG
TAATTTTTTCCCCCCCGCTGGTAGAATTTG

Query= MSMg01no535_p22.b1 MSMg01no535_p22.b1 CHROMAT_FILE:
MSMg01no535_p22.b1 PHD_FILE: MSMg01no535_p22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:58 2005
         (586 letters)



>mm_chr5_65457868_65458853
          Length = 986

 Score = 1052 bits (544), Expect = 0.0
 Identities = 568/576 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaccaatgctcataaaggcaacaagggctgtcaggaatatttgaaaacatcacaa 64
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 205 gaattcaccaatgctcataaaggcaacaagggctgtcaggaatatttggaaacatcacaa 264

                                                                       
Query: 65  acgtcttttcaagaatttgtcaattctctctcccaaacatttgacatttttcaggaagct 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acgtcttttcaagaatttgtcaattctctctcccaaacatttgacatttttcaggaagct 324

                                                                       
Query: 125 ccaaagagcttttaaaaattaaaaagaaccccagtgtggatttcagcctggctgaatctc 184
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 325 ccaaagagcttttaaaaattaaaaagaaccccagtgcggatttcagcctggctgaatctc 384

                                                                       
Query: 185 acaaacaggacagatttccagcagtagaaataaagcctatcacactgcctgtgaccatgt 244
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acaaacaggacggatttccagcagtagaaataaagcctatcacactgcctgtgaccatgt 444

                                                                       
Query: 245 ccaggctgccctgcatgcaatgcttcaacttcttttcaaagagatttctatcaaagttca 304
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 445 ccaggctgccctgcatgcaatgcttcaacttcttttcaaagagatttctatcgaagttca 504

                                                                       
Query: 305 aaggtcttttgcatctaggacatctgggctctaacctcatttcatccttccaaggtaatt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaggtcttttgcatctaggacatctgggctctaacctcatttcatccttccaaggtaatt 564

                                                                       
Query: 365 ttgtgttctcaccgtgtaacctgccagggggtttcacatcactttactgcttgtgggttt 424
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttgtgttctcgccgtgtaacctgccagggggtttcacatcactttactgcttgtgggttt 624

                                                                       
Query: 425 tctgtccaagatcagtttgtctcccacaggggaaaatatctacacctcatgtttggaaag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tctgtccaagatcagtttgtctcccacaggggaaaatatctacacctcatgtttggaaag 684

                                                                       
Query: 485 cctgttttccccaccaattattttatgttcttgtctccaaactactacttgttcagtata 544
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cctgttttccccaccaactattttatgttcttgtctccaaactactacttgttcagtata 744

                                               
Query: 545 tacatacatacatacatacatacatacatacataca 580
           ||||||| ||||||||| ||||||||||||||||||
Sbjct: 745 tacatacctacatacatgcatacatacatacataca 780


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space:   562176
Effective search space used:   562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)