NTTCTCTATATTTGCGGGCGCTATACGACTACTATATCGAGAGGATCCGC
GGAATTCCACATATTTCTTATGTAATTAAATAATATAGTATGTAATAAAC
ATATTTTCCCATTTCATAATAGAGAAATCTCTGTTTGGGAAGAACCAAGA
GACGTATTAATTCTGATAGAGTCCTGAGGAGTCCTTATGCTAGATCATTT
TTTTGTTTACCTTGCTCCCGGATACTGTCACTAATTTCATGTCATAGATA
AACAAATTGGCACAAAGAAGACCAGGGACTCTTTCAAGTTCATAGCTAAC
TGCCCCCAAATACTATACTTGAAGGAAGTTCTGTGATTCTAAAGAATCTG
AACTCTAAACCTAGATCCACAATATCACACTGTTAGAAAAGGATATTAAA
ATGTTGGAGCCAGATCTATGAGTGAGGTAGAAAGGAGAACAATGTTGACC
ACTGAGCAACAAGTAGGACACATGACATACATCAACTCCTCAAGCCTTCC
CTTGGAAGTAACACATATTATAAGAAATCCCAATGATCATATTTAAGCCA
CAGGAAGGATATTTGATATGATGTTTCATAGACAGAACACTTATGATTCC
TTTAGAGAATAGAATGCTTCAGGAAATACCAACTAAAACATTGATACCAA
CACCAAGCATATATAATTCTCTTTTCATAGATCCTTGGNATTATCTATTT
CATTCTTGGTCTTGGGGGATAAGAGATATGCACAAATTCATTACGTTTTC
ATAACAAACTGAACAGTTCTTTAATACGTCAGTAA

NCCCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAGACTTTTAT
CATGAATGGGTGTTGGATTTTGGCAAATGCTTTCTCTGCATCTAATGAGA
TGATCATGTGGTTTTTGGCTTTGAGTTTGTTTATATACTGGATTACATTG
ATGGATTTCCATATATTGAATCATCCTCGAAGATATGGGTACAGGGGAAA
ATTCCTGACTAGAACAGCAATGGCTTGTGCTGTAAGATCAAGAATCTAAA
AGTGGGACCTCATAAAATTGCAAAGCTTCTGCAAGGTAAATGACACGGTC
AATAAGACAAAAAGGTCACCAACAGATTGGGAAAGGATCTTTACCTATCC
TAATTCAGATAGGAGACTAATATCCAATATATATAAAGAACTCAAGAACG
TGGACTCCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCAGAGCTA
AACAAAGAATTATCACCTGAGGAATACTGAATGGCTGAGCAGCACCTGAA
AAAATATTCAAAATCCTTAATCATCAAGGAAATGCAAATCTAAACAACCC
TGAGATTCCACCTCACACCAGTCAGAATGGCTAANGTCAAAAATTCAGGT
GACAGCAGATCCTGGCGAGGATGTGAAGAAAGAAGACACTCCTTCATTGT
TGGTGGGATTGCAGGCTTCTACATACACTCTGGAAATCAGTCTGGCAGTT
CCTCCCAAAACTGGACATAGTACTACCAGAAAGATCTGCCATACTTC

Query= MSMg01no536_g14.b1 MSMg01no536_g14.b1 CHROMAT_FILE:
MSMg01no536_g14.b1 PHD_FILE: MSMg01no536_g14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:30 2005
         (535 letters)



>mm_chr5_41063868_41064802
          Length = 935

 Score = 1006 bits (520), Expect = 0.0
 Identities = 532/536 (99%), Gaps = 2/536 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtaattaaataatatagtatgtaataaacatattttcccatttcataatagagaaatct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtaattaaataatatagtatgtaataaacatattttcccatttcataatagagaaatct 260

                                                                       
Query: 61  ctgtttgggaagaaccaagagacgtattaattctgatagagtcctgaggagtccttatgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtttgggaagaaccaagagacgtattaattctgatagagtcctgaggagtccttatgc 320

                                                                       
Query: 121 tagatcattttttt-gtttaccttgctcccggatactgtcactaatttcatgtcatagat 179
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagatcattttttttgtttaccttgctcccggatactgtcactaatttcatgtcatagat 380

                                                                       
Query: 180 aaacaaattggcacaaagaagaccagggactctttcaagttcatagctaactgcccccaa 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaacaaattggcacaaagaagaccagggactctttcaagttcatagctaactgcccccaa 440

                                                                       
Query: 240 atactatacttgaaggaagttctgtgattctaaagaatctgaactctaaacctagatcca 299
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 atactatacttgaaggaagttctgtgattctaaagaatctgaactctaaaactagatcca 500

                                                                       
Query: 300 caatatcacactgttagaaaaggatattaaaatgttggagccagatctatgagtgaggta 359
           ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 501 caatatcacactgttagaaaaggatattaaaat-ttggagccagatctaagagtgaggta 559

                                                                       
Query: 360 gaaaggagaacaatgttgaccactgagcaacaagtaggacacatgacatacatcaactcc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gaaaggagaacaatgttgaccactgagcaacaagtaggacacatgacatacatcaactcc 619

                                                                       
Query: 420 tcaagccttcccttggaagtaacacatattataagaaatcccaatgatcatatttaagcc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcaagccttcccttggaagtaacacatattataagaaatcccaatgatcatatttaagcc 679

                                                                   
Query: 480 acaggaaggatatttgatatgatgtttcatagacagaacacttatgattcctttag 535
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 acaggaaggatatttgatatgatgtttcatagacagaacacttatgattcctttag 735


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space:   485625
Effective search space used:   485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)