Query= MSMg01no537_b24.b1 MSMg01no537_b24.b1 CHROMAT_FILE:
MSMg01no537_b24.b1 PHD_FILE: MSMg01no537_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:25 2005
(639 letters)
>mm_chr5_47181391_47182430
Length = 1040
Score = 1199 bits (620), Expect = 0.0
Identities = 632/636 (99%), Gaps = 1/636 (0%)
Strand = Plus / Plus
Query: 5 gaattctgccaacaggtttcctaactcaagcaatagtcttgagcaatgaaatgaattatc 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 gaattctgccaacaggtttcctaactcaagcaatggtcttgagcaatgaaatgaattatc 264
Query: 65 tgcaatgacgatatgaataaattactaatagaggactcttcatttatctttaatgctttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcaatgacgatatgaataaattactaatagaggactcttcatttatctttaatgctttg 324
Query: 125 ccaaacaccagcttgattgaaactctgatatttagcagaaaaaagaaagggtgtatcttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccaaacaccagcttgattgaaactctgatatttagcagaaaaaagaaagggtgtatcttg 384
Query: 185 aggaaaaatcaaactagcaagggtaatagagtggagcatttccatgtggaattccatctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggaaaaatcaaactagcaagggtaatagagtggagcatttccatgtggaattccatctg 444
Query: 245 aacaattctgtttctttaaaggtcggaagctcatacatacttggaatttttgctctctgc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aacaattctgtttctttaaaggtcggaagctcatacatacttggaatttttgctctctgc 504
Query: 305 ctttgatttaaagcacaaaatcaaaagcttgttctatgaaaagaaatgcacttgagcaac 364
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctttgatttaaagcgcaaaatcaaaagcttgttctatgaaaagaaatgcacttgagcaac 564
Query: 365 ccaggaatgtgctgaagcctttctacaaattaatctcttctttagtgcagggaaacatgg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ccaggaatgtgctgaagcctttctacaaattaatctcttctttagtgcagggaaacatgg 624
Query: 425 agaccattcagggacagtgggaggagctggggcttgaatttgagccaagcttaatgagga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agaccattcagggacagtgggaggagctggggcttgaatttgagccaagcttaatgagga 684
Query: 485 attggaggcaaaatgggattgaactgtaccttgttaactgatgaaggctgtgaatgcgct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 attggaggcaaaatgggattgaactgtaccttgttaactgatgaaggctgtgaatgcgct 744
Query: 545 agacttactggccaagaattccttccctttgttgcaattaactatagggaatactattga 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agacttactggccaagaattccttccctttgttgcaattaactatagggaatactattga 804
Query: 605 gatagtttt-gtcatctttaaacaccaagatatgat 639
|||||||| ||||||||||||||||||||||||||
Sbjct: 805 tatagtttttgtcatctttaaacaccaagatatgat 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1040
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1030
Effective search space: 647870
Effective search space used: 647870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_b24.g1 MSMg01no537_b24.g1 CHROMAT_FILE:
MSMg01no537_b24.g1 PHD_FILE: MSMg01no537_b24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:25 2005
(564 letters)
>mm_chr5_47327361_47328324
Length = 964
Score = 621 bits (321), Expect = 0.0
Identities = 321/321 (100%)
Strand = Plus / Minus
Query: 244 gcccatgttcatgtatttttcttatacaacccaagcccacttgcctagaaatgatattac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 gcccatgttcatgtatttttcttatacaacccaagcccacttgcctagaaatgatattac 905
Query: 304 cagcaataggctggtcccttctaatttacatagcaatcaataaaacattctacacatatg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 cagcaataggctggtcccttctaatttacatagcaatcaataaaacattctacacatatg 845
Query: 364 tccacaggctaatctaagcaggcatttcctcatttgagtttttctctcccacaaaaatct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 tccacaggctaatctaagcaggcatttcctcatttgagtttttctctcccacaaaaatct 785
Query: 424 aggtttgtgtcaagttgacaagtaactctgagagtttatttatgacataaatatgcatgt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 aggtttgtgtcaagttgacaagtaactctgagagtttatttatgacataaatatgcatgt 725
Query: 484 atcaaaggaattatactacaaagcaaaacagtagtggattgaagagcatctgagttcaag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 atcaaaggaattatactacaaagcaaaacagtagtggattgaagagcatctgagttcaag 665
Query: 544 tgttttgagaacaaatatgaa 564
|||||||||||||||||||||
Sbjct: 664 tgttttgagaacaaatatgaa 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
