NNNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGGA
TCCGCGGAATTCAAGTTAGACTCCAGAGAACCAAATAACCATATTAAAAA
ATGGGTTTCAGAGCTAAGCAAATAATTCTCAATTGAGGAATACCAAATGG
CGGGGAAGCACCTAAAAAAATAAAATAAAATTTAAAAAGTTCAACATCTT
TTGTCATCCTTGGCAAATCAAAACAACATTGAGATTCCACCTCAGACAAG
TCAGAATGGTTACGATAAAAAATTCAGGTAACAGCAGATGCTGGCAAGGG
TGTGGAGAAAGGGGAATACTCCTTCATTGCTGGTGGAATTGCAAGCTGAT
AAAACCACTCTGGAGATTAGCTTGGCTGTTCCTCAGAAAATTGGTCATTT
TAGTACTGGAGGATCCAGCAATACCACTCCTGTGCATATACCCAGAAGAT
GTTCCAACATGTAAGAAGGACACATACTCCATTATGTTCATAGCAGCCTT
ATTTATATTAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGG
AATGGATACATAAAATGTGGCACATTTATACAATGGAGTACTAGTCAGCT
ATTGAAAACAATGAATTTATGAAATTCTTAGACAAATGGATGAAACCAGA
GGATATCATCCCGAATGAGGTAGCCCAATCACAAAATAACACATATGATA
TGCATTCATTGATAAGTGGATATTAGCCCAGAAGCTCAGAATACCC

TGCACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACTAACTTCGCTTGATCTGACTTG
CTTTAGTTTAATCAATAATTTGGAATCAAGGATTTCCATGATCACATTTT
TTTTTTTTTGCGAAGTAGCTTGCAAATATTTAAAAGTGTACATAACCTTT
TTGGAAAATCCCTGGTTTGGATTAATTTTAGCTGAAGAGCTGTTTGGAAG
TTCATGGTCCATGGGGAGGGAAAAATTAATTTTCCCTTGGGTGTTAATCA
TGGGTAGTTTGTCCATTTCCTTGTCCTGGATTCTGTATTCATTTGTATAA
TGTCACAATGTTTGGATTCTATGCTTTAAAAGAATAGTAATTTTAAAAAT
AACATTTCCAAGAATGGTTTCCCAAAGCTTTTATCCCAACATGTATAAAG
AATAAGTAGGAAAATCTCTGAGTCGTCAGTTCTCCCAGTCTTCATAGTGA
CATCTGGGATAGTCACAGCTCCTGAATGAGGCCCTGTCTCACAGCACAAC
AAACAAACAAATAAAAATGGAGAATTTGAACTTCAGAGGTCACAAGGGAA
ATTGGAGGGAGAATGTGAAGGGCAGATAAAATCAGTTATATTGTATGTGT
GTTTGAAACTTTCAAAGAATAAAAGAAAAATTAAAATGTAGTATCTACTG
TGCTTTTGCTATATTAATTTTATTATACATACTGGACTTTTAACT

Query= MSMg01no537_d17.g1 MSMg01no537_d17.g1 CHROMAT_FILE:
MSMg01no537_d17.g1 PHD_FILE: MSMg01no537_d17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:33 2005
         (669 letters)



>mm_chr5_60609499_60610567
          Length = 1069

 Score = 1278 bits (661), Expect = 0.0
 Identities = 667/669 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   actaacttcgcttgatctgacttgctttagtttaatcaataatttggaatcaaggatttc 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 actaacttcgcttgatctgacttgctttagtttaatcaataatttggaatcaagcatttc 260

                                                                       
Query: 61  catgatcacatttttttttttttgcgaagtagcttgcaaatatttaaaagtgtacataac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catgatcacatttttttttttttgcgaagtagcttgcaaatatttaaaagtgtacataac 320

                                                                       
Query: 121 ctttttggaaaatccctggtttggattaattttagctgaagagctgtttggaagttcatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttttggaaaatccctggtttggattaattttagctgaagagctgtttggaagttcatg 380

                                                                       
Query: 181 gtccatggggagggaaaaattaattttcccttgggtgttaatcatgggtagtttgtccat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtccatggggagggaaaaattaattttcccttgggtgttaatcatgggtagtttgtccat 440

                                                                       
Query: 241 ttccttgtcctggattctgtattcatttgtataatgtcacaatgtttggattctatgctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttccttgtcctggattctgtattcatttgtataatgtcacaatgtttggattctatgctt 500

                                                                       
Query: 301 taaaagaatagtaattttaaaaataacatttccaagaatggtttcccaaagcttttatcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaaagaatagtaattttaaaaataacatttccaagaatggtttcccaaagcttttatcc 560

                                                                       
Query: 361 caacatgtataaagaataagtaggaaaatctctgagtcgtcagttctcccagtcttcata 420
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 caacatgtataaagaataagtagggaaatctctgagtcgtcagttctcccagtcttcata 620

                                                                       
Query: 421 gtgacatctgggatagtcacagctcctgaatgaggccctgtctcacagcacaacaaacaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgacatctgggatagtcacagctcctgaatgaggccctgtctcacagcacaacaaacaa 680

                                                                       
Query: 481 acaaataaaaatggagaatttgaacttcagaggtcacaagggaaattggagggagaatgt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acaaataaaaatggagaatttgaacttcagaggtcacaagggaaattggagggagaatgt 740

                                                                       
Query: 541 gaagggcagataaaatcagttatattgtatgtgtgtttgaaactttcaaagaataaaaga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaagggcagataaaatcagttatattgtatgtgtgtttgaaactttcaaagaataaaaga 800

                                                                       
Query: 601 aaaattaaaatgtagtatctactgtgcttttgctatattaattttattatacatactgga 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaaattaaaatgtagtatctactgtgcttttgctatattaattttattatacatactgga 860

                    
Query: 661 cttttaact 669
           |||||||||
Sbjct: 861 cttttaact 869


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space:   697881
Effective search space used:   697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)