Query= MSMg01no538_e18.b1 MSMg01no538_e18.b1 CHROMAT_FILE:
MSMg01no538_e18.b1 PHD_FILE: MSMg01no538_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:55 2005
(370 letters)
>mm_chr5_101994556_101995325
Length = 770
Score = 619 bits (320), Expect = 0.0
Identities = 332/336 (98%)
Strand = Plus / Minus
Query: 5 gaattctctagcagactgctctctattcccggggctcctggagagtctggctgctgtgct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gaattctctagcagactgctctctattcccggggctcctggagagtctggctgctgtgct 481
Query: 65 ggctggcagggcccctccctcctcaccatctgactaagcatcacataaaggttctctctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ggctggcagggcccctccctcctcaccatctgactaagcatcacataaaggttctctctc 421
Query: 125 agtgccttgctcagctgcagcgactaggcaatttccttgcagcggggacgtgtccgattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 agtgccttgctcagctgcagcgactaggcaatttccttgcagcggggacgtgtccgattt 361
Query: 185 caaattttcttttccccatttttctttggccgttcatgcttgagaacacctggaattttc 244
|||||||||||||| ||||||||||||||| ||||| |||||||||||| ||||||||||
Sbjct: 360 caaattttcttttctccatttttctttggctgttcacgcttgagaacacttggaattttc 301
Query: 245 taagcattttggtggtaaaaagggtaaacatgtgtttgaatggtagcagttcgtttgggc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 taagcattttggtggtaaaaagggtaaacatgtgtttgaatggtagcagttcgtttgggc 241
Query: 305 catatctgtggagggtattctctgtgtgtggacgtg 340
||||||||||||||||||||||||||||||||||||
Sbjct: 240 catatctgtggagggtattctctgtgtgtggacgtg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no538_e18.g1 MSMg01no538_e18.g1 CHROMAT_FILE:
MSMg01no538_e18.g1 PHD_FILE: MSMg01no538_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:55 2005
(331 letters)
>mm_chr5_101861894_101862624
Length = 731
Score = 607 bits (314), Expect = e-178
Identities = 326/330 (98%), Gaps = 1/330 (0%)
Strand = Plus / Plus
Query: 1 tgcacagggctagttctgctcctttctgggtagtggcgggcatggcttggtgatacactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcacagggctagttctgctcctttctgggtagtggcgggcatggcttggtgatacactg 260
Query: 61 agatttgccatgggatctaggacaggtttaagtcagtccttgaccttaaaaaagcttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agatttgccatgggatctaggacaggtttaagtcagtccttgaccttaaaaaagcttcaa 320
Query: 121 tttgttcaactcaattaggtagctgtgtatgcattctacaacttcttctgttaagggagg 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgttcaactcaattaggtagttgtgtatgcattctacaacttcttctgttaagggagg 380
Query: 181 taggaaggaggagaggggaggaaagaaacaaagaagaagagggaggaaccatgggtatct 240
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 381 taggaaggaggagaggggaggaaagaagcaaagaaga-gagggaggaaccatgggtatct 439
Query: 241 atgactgggagaagaagaagaaaaagaagaagaaaaagaagaagaagaagaagaagaaga 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 440 atgactgggagaagaagaagaaaaagaagaagaagaagaagaagaagaagaagaagaaga 499
Query: 301 agaagaagaagaagaagaagaagaagaaga 330
||||||||||||||||||||||||||||||
Sbjct: 500 agaagaagaagaagaagaagaagaagaaga 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 117
Number of extensions: 33
Number of successful extensions: 33
Number of sequences better than 10.0: 1
Number of HSP's gapped: 31
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
