XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTAACAGC
TTTGGCTATGAGAGAGGCCAGAGGGTGGGAATCTCAAACTAGGATTTTGT
ACATAGAGTGAACAGAGGTCCCAGGATTCTTGAGCTGTGCTAGTTAGAGC
ATTTTATTGGGATTGTTGATGTGGAATTGGGGGAGGGGCATGTCCACAAA
TTTGACAGAGCAAATTTACAACTTTATTTTTACTAATCTTTGAAGTTGAG
GAGTCCTTTAATTACAGTGTAAGGTAAAAGCCACATTCATGCTAGTAATA
ATGGTGACTCAGTCATGGGTAAAGATCCAGAGTACTTTTGGCAACATTCC
AGTGATGATTTAAACGTATCTCTACCTTGAAATTATGGCCGTTAATAGAC
TTGCTACAAGATCTTGTTATTTTGTTCATTACAGAACAAGTACATATCTT
CGTGAAATACTTTCGATGACTGTATTTCAATATAATTGGTATAATTAATA
TGGTGGCCTTTGGTGTATTATATGCCCTTGCTCCTCTTCCTCTTCTTCTA
GAAAGATTATTATGGGTAGAGTTATGTGGACCAGATGCTGATTTGCTGGA
GGAAACCATGGTATATTCATTCAGAAGACCTGAGAAGCTCCTAGACTCCG
GGACAGTTGCTTACTGGGCCTCTGTACAGGGGGATCCACAACGGGCTGAC
ATCATGGTCTCTCCATATGGGTGAGAGAAGGTCATGTGTGTCCAGAC

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCTGTTTAGCTTGGTATCCCATTTTCATAGGGT
TATATGATTGTCTGGAGTCTAATTTCTTGAGTTCTTTGTATATATTGGAT
ATTAGCCCTCTATCAGATGTAGGATTGGTAAAGATCTTTTCCCACTCTGT
TGGTTGCCAGATTGTCCTATTGACAGTGTCCCTTCCCTTACAGAAGCTTT
GCAATTTTATAAGGTCCCATTTGTCAGTTCTTGATCTTAGAGCATAAGTC
ATTGGTGTTCTGTTCAAGAACTTTCCCTCTGTGCCCATGTATTTGAGGCT
CTTCCCCACTTTTTCTTCTATTAGTTTCAGTGTATCTGGTTTTATGTGGA
TGTCCTTGATCCACTTGGACTTGAGCTTTGTACAAGGAGATAAGAATGGG
TCGATTTGCCTTCTTCTATATGCTGACTGACAGTTAAAAATGCTGTCTTT
TTTTTTCGACTGGATGGTTTTAACTCCTTTGTCAAAGATCAAGTGGCCAT
ATGTGTGTAAGTTCATTTCTGGGTCTTCAATTCTATTCCATTGATCTTCC
TGTCTGTCTCTGTACCAATACCATACATTTTTAAAATCAGTATTGCTCTG
TAATACAGCTTGAGGTCAGGGATGGTGACTCCCCAAGAAGTTCTTTTATT
GTTGAGAATAGTTTTTGCTAGCCTGGGTTTTTATTATTCCAAATGAAT

Query= MSMg01no538_l23.b1 MSMg01no538_l23.b1 CHROMAT_FILE:
MSMg01no538_l23.b1 PHD_FILE: MSMg01no538_l23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:28 2005
         (589 letters)



>mm_chr5_4486637_4487625
          Length = 989

 Score = 1116 bits (577), Expect = 0.0
 Identities = 583/585 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctaacagctttggctatgagagaggccagagggtgggaatctcaaactaggattt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaacagctttggctatgagagaggccagagggtgggaatctcaaactaggattt 264

                                                                       
Query: 65  tgtacatagagtgaacagaggtcccaggattcttgagctgtgctagttagagcattttat 124
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 265 tgtacatagagtgaacagaggtcccaggattcttgagctgtgctagtcagagcattttat 324

                                                                       
Query: 125 tgggattgttgatgtggaattgggggaggggcatgtccacaaatttgacagagcaaattt 184
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 325 tgggattgttgatgtggaattgggggaggggcgtgtccacaaatttgacagagcaaattt 384

                                                                       
Query: 185 acaactttatttttactaatctttgaagttgaggagtcctttaattacagtgtaaggtaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acaactttatttttactaatctttgaagttgaggagtcctttaattacagtgtaaggtaa 444

                                                                       
Query: 245 aagccacattcatgctagtaataatggtgactcagtcatgggtaaagatccagagtactt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagccacattcatgctagtaataatggtgactcagtcatgggtaaagatccagagtactt 504

                                                                       
Query: 305 ttggcaacattccagtgatgatttaaacgtatctctaccttgaaattatggccgttaata 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttggcaacattccagtgatgatttaaacgtatctctaccttgaaattatggccgttaata 564

                                                                       
Query: 365 gacttgctacaagatcttgttattttgttcattacagaacaagtacatatcttcgtgaaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gacttgctacaagatcttgttattttgttcattacagaacaagtacatatcttcgtgaaa 624

                                                                       
Query: 425 tactttcgatgactgtatttcaatataattggtataattaatatggtggcctttggtgta 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tactttcgatgactgtatttcaatataattggtataattaatatggtggcctttggtgta 684

                                                                       
Query: 485 ttatatgcccttgctcctcttcctcttcttctagaaagattattatgggtagagttatgt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttatatgcccttgctcctcttcctcttcttctagaaagattattatgggtagagttatgt 744

                                                        
Query: 545 ggaccagatgctgatttgctggaggaaaccatggtatattcattc 589
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ggaccagatgctgatttgctggaggaaaccatggtatattcattc 789


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space:   566841
Effective search space used:   566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)