Query= MSMg01no539_b02.b1 MSMg01no539_b02.b1 CHROMAT_FILE:
MSMg01no539_b02.b1 PHD_FILE: MSMg01no539_b02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:53 2005
(688 letters)
>mm_chr5_26900963_26902050
Length = 1088
Score = 1236 bits (639), Expect = 0.0
Identities = 677/695 (97%), Gaps = 12/695 (1%)
Strand = Plus / Minus
Query: 5 gaattctttttgattctttttatgtctaccactgttctatctacatgcatgtctgtatac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 gaattctttttgattctttttatgtctaccactgttctatctacatgcatgtctgtatac 755
Query: 65 tgagtatgtacccctagacacatgaggagggca--tgg-----ga----tgagtcaccat 113
||||||||||||||||||||||||||||||||| ||| || |||||||||||
Sbjct: 754 tgagtatgtacccctagacacatgaggagggcatttggatccagatttctgagtcaccat 695
Query: 114 attgatgctacaaatcaaacctaattcctttgcaagaacagtctgtgctcttaaccactg 173
|||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 694 attgatgctacaaaccaaacctagttcctttgcaagaacagtctgagctcttaaccactg 635
Query: 174 agccatctcttcagcctcataagatgtataattcttcatgcactatttatctatttgctt 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 agccatctcttcagcctcataagatgtataattcttcatgcactatttatctatttgctt 575
Query: 234 aagaatcacagcttgaattaacataaacccacagtattaatttagggggaaatggataac 293
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 574 aagaatcacagcttgaattaacataaacccacagtattaatttagggggaaacggataac 515
Query: 294 taagaggatggaggcacaacttcccaaagatgaagattcatgattcaatgatttgctgta 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 taagaggatggaggcacaacttcccaaagatgaagattcatgattcaatgatttgctgta 455
Query: 354 gtagagtcagattgaggccatagctacacgtgaatgagcacagctttcctctgtttagaa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gtagagtcagattgaggccatagctacacgtgaatgagcacagctttcctctgtttagaa 395
Query: 414 catgtttatgatcttttgaattctgtgtcccacaccttatgtagcaaaatttcattggag 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 catgtttatgatcttttgaattctgtgtcccacaccttatgtagcaaaatttcattggag 335
Query: 474 aacaattctataggactagtaaattgggggcaggacattttgttttggcctttcctattt 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 334 aacaattctataggactagtaaattgggggcaggacattttgttttggcctttccta-tt 276
Query: 534 ttttggtgtttgccatatgacctggacatctggttctttccttggtggtaaagagccaca 593
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 275 ttttggtgtttgccatatgacctggacatctggttttttccttggtggtaaagagccaca 216
Query: 594 atcagtggctgctgaaaaaaagagtcagttttcaccagaaatgagcttcttgacagatta 653
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atcaatggctgctgaaaaaaagagtcagttttcaccagaaatgagcttcttgacagatta 156
Query: 654 tccagttccaggtaagcagccctaaacacatgtac 688
|||||||||||||||||||||||||||||||||||
Sbjct: 155 tccagttccaggtaagcagccctaaacacatgtac 121
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1088
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1078
Effective search space: 730884
Effective search space used: 730884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_b02.g1 MSMg01no539_b02.g1 CHROMAT_FILE:
MSMg01no539_b02.g1 PHD_FILE: MSMg01no539_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:53 2005
(635 letters)
>mm_chr5_26725421_26726455
Length = 1035
Score = 1137 bits (588), Expect = 0.0
Identities = 624/636 (98%), Gaps = 1/636 (0%)
Strand = Plus / Plus
Query: 1 aaggctgtgctgcagaatcaccttgttgggtgaaaaaacatttagctgcaggctcagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggctgtgctgcagaatcaccttgttgggtgaaaaaacatttagctgcaggctcagaat 260
Query: 61 ggcacatggccaggagtgggacacagtggtggttcatgttctgccctttgcctttgggtt 120
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 261 ggcacatggccaggagtgggacacagtggtcattcatgttctgtcctttgcctttgggtt 320
Query: 121 aatagacatttctccaacccatcaacctctccagtgagttagatttatatatctgtaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatagacatttctccaacccatcaacctctccagtgagttagatttatatatctgtaatt 380
Query: 181 agttagattcttttgaaagaaaaacttgtacatgtatgtagcatgtatgctatgtgtatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttagattcttttgaaagaaaaacttgtacatgtatgtagcatgtatgctatgtgtatg 440
Query: 241 ctacatgtatgatgctgatgtgtgtgtatgtgcatgtgcacatgagtgcagctatgtatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctacatgtatgatgctgatgtgtgtgtatgtgcatgtgcacatgagtgcagctatgtatg 500
Query: 301 tgccacagcacgtgcatagagcttagacgatagcttctgttatttcccgctttttatcct 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 tgccacagcacgtgcatagagcttagacgatagcttctgttatttcccgccttttatcct 560
Query: 361 gtttgagatagacgtcttgctgttcgctgctgtgtatggcagtcccacaagctcctggtg 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtttgagatagatgtcttgctgttcgctgctgtgtatggcagtcccacaagctcctggtg 620
Query: 421 attctcctgtttgtctccctcatctccaggggtatcttagtcacgattctattgctgtga 480
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 attctcctgtttgtctcccccatctccagggatatcttagtcacgattctattgctgtga 680
Query: 481 agaggcaccatgaaagtatatatttgggacttgcttacagttccagaggttcagtc-att 539
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 681 agaggcaccatgaaagtatatatttgggacttgcttacagtttcagaggttcagtccatt 740
Query: 540 gacatcatggtggggaacatggcagcatgctgacagacctggcattggacatattgagag 599
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 741 gacatcatggtggggaagatggcagcatgctgacagacctggcattggacacattgagag 800
Query: 600 ttccacatccagatttacagccagcaaataagagac 635
||||||||||||||||||||||||||||| ||||||
Sbjct: 801 ttccacatccagatttacagccagcaaatgagagac 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space: 640625
Effective search space used: 640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
