CCCATATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTTGTTTACTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT
TTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCC
CTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCT
TTTTGTCTTATTGACAGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCA
TTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTT
CTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCAC
TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGA
TCCACTTAGATTTGACCTTAGTACAAGGACATAAGTATGGATCGATTCGC
ATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAAT
GCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGT
GACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGG
TCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGC
TCTGTAGTAAAGCTTTAGGTCTGGCATGGTGATTCCGCCAGAAGTTCTTT
TATCCTTGAGAAGACTTTTTGCTATCCTAGGTTTTTTGTTATTCAGACAA
AATTGCAAATTGCTCCTTTCCATTCGTTGA

CTCGCAATGCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGATGGATTGAAGGTG
TGTACTAAGGGCATGTTTATACTCCAGCCAGATCACACAGATCTAGAAGG
TCTTTGGACGTTATCACATCAGCCACATTGCTAGAATAAAATTCCTCTAC
ACTAACATTTCACAGTACTTCTGCCTTTCACTTCTTTATCTATGAATTAT
ACACAGTGATACATTACCATGGATCATACATTTTTAAGACTCGATAAACA
TGCTAAATAAACATAAACTTTAATCACCATTTATTCAATGTTTTGTTGTA
AGTCATATTCTAATCTATAACAAGGAGTCTACTGTATTAGTTTATAAATA
TATGCAAGCACTAAGAAGGAAGAAGATGCTCAGCTTTGTTATGTGATCAT
CTTTCCCTATTAAGTTTACAATTGAAAAAAATAATGGAAAAAAATCAAGC
TTTATTGTGCATTTGCTATGACAAAAATTAGCATTTTCTAAATTTCTACC
CTAACAATAGTTGAATATGTAGCATCATTCCCTCCCAGTTTAATTTTGAT
TACAGATTGAATAAGAACTATAGTTATATACTTCAAAATGATACTGCTTG
AAGTTATAATTTCTAGAAGCTGATATTTAAAGTTATTAAGAGTTATGACT
TAATCAGGAAAATTTTAGGATTATGGTTAACTTTATG

Query= MSMg01no539_d15.g1 MSMg01no539_d15.g1 CHROMAT_FILE:
MSMg01no539_d15.g1 PHD_FILE: MSMg01no539_d15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:06 2005
         (654 letters)



>mm_chr5_10781444_10782495
          Length = 1052

 Score = 1172 bits (606), Expect = 0.0
 Identities = 642/654 (98%), Gaps = 2/654 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagatggattgaaggtgtgtactaagggcatgtttatactccagccagatcacacagatc 60
           |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 970 cagatgtattgaaggtgtgtactaagggcatgtttatattccagccagatcacacagatc 911

                                                                       
Query: 61  tagaaggtctttggacgttatcacatcagccacattgctagaataaaattcctctacact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 tagaaggtctttggacgttatcacatcagccacattgctagaataaaattcctctacact 851

                                                                       
Query: 121 aacatttcacagtacttctgcctttcacttctttatctatgaattatacacagtgataca 180
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 850 aacatttcacagtacttctgccttttacttctttatctatgaattatacacagtgataca 791

                                                                       
Query: 181 ttaccatggatcatacatttttaagactcgataaacatgctaaataaacataaactttaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ttaccatggatcatacatttttaagactcgataaacatgctaaataaacataaactttaa 731

                                                                       
Query: 241 tcaccatttattcaatgttttgttgtaagtcatattctaatctataacaaggagtctact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 tcaccatttattcaatgttttgttgtaagtcatattctaatctataacaaggagtctact 671

                                                                       
Query: 301 gtattagtttataaatatatgcaagcactaagaaggaagaagatgctcagctttgttatg 360
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 670 gtattagtttataaatatatgcaagcactaagaaggaagaagattctcagctttgttatg 611

                                                                       
Query: 361 tgatcatctttccctattaagtttacaattgaaaaaaataatggaaaaaaatcaagcttt 420
           ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 610 tgatcatctttccctattaagtttacaattg-aaaaaataatgg-aaaaaatcaagcttt 553

                                                                       
Query: 421 attgtgcatttgctatgacaaaaattagcattttctaaatttctaccctaacaatagttg 480
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 552 attgtgcatttgctatgacaaagattagcattttctaaatttctaccctaacaatagttg 493

                                                                       
Query: 481 aatatgtagcatcattccctcccagtttaattttgattacagattgaataagaactatag 540
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aatatgtagcatcattccatcccagtttaattttgattacagattgaataagaactatag 433

                                                                       
Query: 541 ttatatacttcaaaatgatactgcttgaagttataatttctagaagctgatatttaaagt 600
           ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 432 ttacatacttcaaaatgatactgcttgaagttgtaatttctagaagctgatatttaaagt 373

                                                                 
Query: 601 tattaagagttatgacttaatcaggaaaattttaggattatggttaactttatg 654
           ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 372 tattaagagttataacttaatcaggaaaattttaggattgtggttaactttatg 319


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1052
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1042
Effective search space:   671048
Effective search space used:   671048
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)