NNNNTTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTGTAGTTCTAGACACAAGAGTAAATTCTTAGGTTTAACA
GCCTTTGTTATGCAAACCTTGCTCCTTAATTTAAAACTGTTATGAGGTTT
GGTCTGTTGCTATGTATTGTAATGTTACATACTGGGTTTGGTTGGTTGCT
ATGTATTGTAATGCTACATACTGGGTTTGGTCTGTTGCTATGTATTGGAA
TGCTACATACTAGCTCTGGTTACCTCAGGAACTAGGAGATCCTCCTGTAG
ATCAAGTGACACTATGTAACCTTGCCCCAAGATACCTACAGCTGGGCAGC
AGAGAGATGGGCGGAGTTTCAAATGCCAGGCTTGGGAACTGAGGCAGGAG
ACCACAAGGGAAAGAAGAAGTTGGAGAGGGAAGACATCATAGAGTAGATG
AATCATGAAAACATGGCCAGGAGGGCGGGTCAACTGGAGTAAGAGTGGCC
AGGCAGGACATGACAAATTATAACTTGGGGTTATTGTTGAGGAAATAGAT
TCTAACAGCTTAGAGGAAAGCTATCTGCCCAGCTCTAATGCTTTAGAAGT
TTATCATAAATATAAAGGTTTTGTTCCTTTATCTAGGAACTGAATGATCA
AAGGTGGGGTAGAAAGCCCTGATTGATGAGTAAATATTATCTACAACAGA
TCTTTTTCTTTTTTCTCTTTTTGNAAGGNTGGGGACAAGGGTGGCCTTGT
CCATGTTACCTGNNGAGC

CAATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTAATACCGAAAGGAGACACACACAC
TAGGTTAGTATTTTATCATCTTGCATTTTGGTTCACTCAACTACTCTGTA
AGACAACAAGGGCTGCAAAAATGCCGTCCTGTAGAGTACCTGCCTGACAA
GCATGAAACCCTGAGGACCCATCACCCACATAAAGAGCCAAGTGAGGCTA
TTAGCACCTGTAATCCCAGCACCGAGGAGGAGGAGACAGGTCCAGGTTCA
GTTAGAGACCCTATCTCAAAAGTAACTCCTACAACAAAGAGGAGGGCGCT
GCCTGGTGCATCTTCACTCCTCAACCCACCTGTGGCACTCATCATACCTG
CTTCAAAGATGAGAAACACCAAGACTAAGACATTAAAAATCTGACCAAGG
TTACAAAGCTAGTCAGGAAGCCACTTGTCACACATCTTATTTCCAAACCT
TCACTGTTAACTAAATCAGCAGAAATGAAAAGGAATTACGTTTTGGTAAA
ACAAACAGATATTCTAGATTTCAAATGAAAGCAGGCACATGAAACATACA
CTGACAGATCTTGGCTACTGAGGCTTGAGGACCCTTCAGAGCAGAGCCAT
CTGGAAAATCTAGCTACTTGGAAATATAATCCCATCAATAGTTTATTTGA
ACAGAACCACATTTAAAACAAAAACAAACTAAAAAAAAAAAAACTAACTC
CAACAGAATCACGCCTTTN

Query= MSMg01no539_f21.g1 MSMg01no539_f21.g1 CHROMAT_FILE:
MSMg01no539_f21.g1 PHD_FILE: MSMg01no539_f21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:18 2005
         (676 letters)



>mm_chr5_148248742_148249819
          Length = 1078

 Score =  615 bits (318), Expect = e-180
 Identities = 452/568 (79%), Gaps = 112/568 (19%)
 Strand = Plus / Minus

                                                                        
Query: 113  tacctgcctgacaagcatgaaaccctgaggacccatcacccacataaagagccaagtgag 172
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1078 tacctgcctgacaagcatgaaaccctgaggacccatcacccacataaagagccaagtgag 1019

                                                                        
Query: 173  gctattagcacctgtaatcccagcaccgaggaggaggagacaggtccaggttcagttaga 232
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 gctattagcacctgtaatcccagcaccgaggaggaggagacaggtccaggttcagttaga 959

                                                                        
Query: 233  gaccctatctcaaaagtaactcctacaacaaagaggagggcgctgcctggtgcatcttca 292
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 958  gaccctatctcaaaagtaactcctacaacaaagaggagggcgctgcctggtgtatcttca 899

                                                                        
Query: 293  ctcctcaacccacctgtggcactcatcatacctgcttcaaagatgagaaacaccaagact 352
            |||||||||||||||                                             
Sbjct: 898  ctcctcaacccacct--------------------------------------------- 884

                                                                        
Query: 353  aagacattaaaaatctgaccaaggttacaaagctagtcaggaagccacttgtcacacatc 412
                                                                        
Sbjct: 884  ------------------------------------------------------------ 884

                                                                        
Query: 413  ttatttccaaaccttcactgttaactaaatcagcagaaatgaaaaggaattacgttttgg 472
             ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 883  -tatttccaaaccttcactgttaactaaatcagcagaaatgaaaaggaattatgttttgg 825

                                                                        
Query: 473  taaaacaaacagatattctagatttcaaat-gaaagcaggcacatgaaacatacactgac 531
            |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 824  taaaacaaacagatattctagatttcaaattgaaagcaagcacatgaaacatacactgac 765

                                                                        
Query: 532  agatcttggctactgaggcttgaggacccttcagagcagagccatctggaaaatctagct 591
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 764  agatcttggctactgaggcttgaggaccctccagagcagagccatctggaaaatctagct 705

                                                                        
Query: 592  acttggaaatataatcccatcaatagtttatttgaacagaaccacatttaaaacaaaaa- 650
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 704  acttggaaatataatcccatcaatagtttatttgaacagaaccacatttaaaacaaaaaa 645

                                        
Query: 651  -caaacta-aaaaaaaaaaaactaactc 676
             ||||  | |||||||||||||||||||
Sbjct: 644  acaaa--acaaaaaaaaaaaactaactc 619


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1078
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1068
Effective search space:   711288
Effective search space used:   711288
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)