TCCTACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAGAGACTGTTTTTCCAAGCAGACCAATTCAGTGAGAAGCC
CAGAGAAGCCAGTTTGACAAAGTCATCTTGGAGAGAAGTCTGGGCCATAA
CAGCTGAGTTGAACCAGCCGGCCAGAGTTCAGAAAGAACTAGAAAGGGTG
GGCTTATTCAGCAGCAAGACAAGAATTACATTAGGTAAATAAAAGTTAAA
TTTACAGCCCTGATTGGCCTACATCTCTCATGGATAAGGATGACCTTTAA
TTCAGAGATCCACTTACTTCTGATGCCTGGTTGCTGGGACTAAATGTGTG
TGCCACTTCGTCTGACCTAATTATACGATATAAATATATATGTGTGTATA
CGTGTGTGTGTATACACTGTGACACATTTCAAAAACCTTCAATGCCCTCG
TGAGCTCAGTGAAACTTTTTTTAGCCTTAAATGCTTTGAGTTCTACCATC
ATTGCATTCTAAAAATTAATCTGCACATAAGACATTGTTCATAATGTCCA
CATTTCCTGGAATTTCTCACCTGCGGCGCTTGCAAGTTTCCAGATACAGG
ACTCTTTTTATTCCTTATCCTACATACCTGCTCTGACTTATATCTATCAA
CGGGGGTTTGGAGCCCCATTTTCTTTTGCCTAGTTGAAATAATCCCCTGT
ATCCCGATGTTCCCGTTTGAGGGGCTCATTTTGGTATGTAATATCCTGCC
CN

CCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGGGAGTTCAAGGCCAGCC
TGGTCTACACAGTGAGTACCAGAACAGCCTGGACTATGCAAAAATAAATA
AAATAAAATATAGAGAAAGAAAGGAATCTTTTTGTTTGGAAGTTCATACT
TCTAAGCATCGTTTGATTCAGATCTCCTACTAAGGAGTTAATTGCTTTCT
AACAGAACAACTAGGGCTTCTAATCCAGCTTCCAGGTCACGGGCAACTTC
AGTTAGAAGCCATGCAAACGTCACCTTAAATCCTTCCATTTTACTGTTTC
TTTCTGATCAGGCCTTACAAAGCACCCTATGCTGGTCTTGAGTTCACATT
CCTGCCTCCAACCCCAGAGCTTTAGAATCACAAAGATAAGCCACCATGCA
ACCAGAAGAGCTCTGCAGTCTATCGGGAGCTCCTGCATCCAGGCCAAGCA
CACATTACATGGGTTAGAGTTGTCTCAGAACAAAATGGAGACACTTCCCA
TTCTCAGCTGGGTCTTGTGACAGACACATCTAATGTGATGGAAAGACAGT
GAACAAGAGCAAGAGAGGAGTTAAATGAGGCCCCAGATCAAACAGGGCTT
TTGATGTTACTCTGTAGATCATGGGAAGTCACTTGGGGACAAGGTTTCAG
TAGGGGAGTCACAGAGCTTTATGTATGCTTTAAAGACAATGTCTGTGG

Query= MSMg01no543_m03.g1 MSMg01no543_m03.g1 CHROMAT_FILE:
MSMg01no543_m03.g1 PHD_FILE: MSMg01no543_m03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:13 2005
         (661 letters)



>mm_chr5_3397703_3398763
          Length = 1061

 Score = 1270 bits (657), Expect = 0.0
 Identities = 660/661 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctgggagttcaaggccagcctggtctacacagtgagtaccagaacagcctggactatgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 tctgggagttcaaggccagcctggtctacacagtgagtaccagaacagcctggactatgc 770

                                                                       
Query: 61  aaaaataaataaaataaaatatagagaaagaaaggaatctttttgtttggaagttcatac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 aaaaataaataaaataaaatatagagaaagaaaggaatctttttgtttggaagttcatac 710

                                                                       
Query: 121 ttctaagcatcgtttgattcagatctcctactaaggagttaattgctttctaacagaaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 ttctaagcatcgtttgattcagatctcctactaaggagttaattgctttctaacagaaca 650

                                                                       
Query: 181 actagggcttctaatccagcttccaggtcacgggcaacttcagttagaagccatgcaaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 actagggcttctaatccagcttccaggtcacgggcaacttcagttagaagccatgcaaac 590

                                                                       
Query: 241 gtcaccttaaatccttccattttactgtttctttctgatcaggccttacaaagcacccta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 589 gtcaccttaaatccttccattttactgtttctttctgatcaggccttacaaagtacccta 530

                                                                       
Query: 301 tgctggtcttgagttcacattcctgcctccaaccccagagctttagaatcacaaagataa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 tgctggtcttgagttcacattcctgcctccaaccccagagctttagaatcacaaagataa 470

                                                                       
Query: 361 gccaccatgcaaccagaagagctctgcagtctatcgggagctcctgcatccaggccaagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 gccaccatgcaaccagaagagctctgcagtctatcgggagctcctgcatccaggccaagc 410

                                                                       
Query: 421 acacattacatgggttagagttgtctcagaacaaaatggagacacttcccattctcagct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 acacattacatgggttagagttgtctcagaacaaaatggagacacttcccattctcagct 350

                                                                       
Query: 481 gggtcttgtgacagacacatctaatgtgatggaaagacagtgaacaagagcaagagagga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gggtcttgtgacagacacatctaatgtgatggaaagacagtgaacaagagcaagagagga 290

                                                                       
Query: 541 gttaaatgaggccccagatcaaacagggcttttgatgttactctgtagatcatgggaagt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gttaaatgaggccccagatcaaacagggcttttgatgttactctgtagatcatgggaagt 230

                                                                       
Query: 601 cacttggggacaaggtttcagtaggggagtcacagagctttatgtatgctttaaagacaa 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 cacttggggacaaggtttcagtaggggagtcacagagctttatgtatgctttaaagacaa 170

            
Query: 661 t 661
           |
Sbjct: 169 t 169


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space:   684201
Effective search space used:   684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)