Query= MSMg01no543_o12.b1 MSMg01no543_o12.b1 CHROMAT_FILE:
MSMg01no543_o12.b1 PHD_FILE: MSMg01no543_o12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:24 2005
(651 letters)
>mm_chr5_43982917_43983967
Length = 1051
Score = 1234 bits (638), Expect = 0.0
Identities = 647/650 (99%)
Strand = Plus / Minus
Query: 1 ggctgtgttggagtgctgttgagattaggtaactgatttgaaaatattttgactgaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 ggctgtgttggagtgctgttgagattaggtaactgatttgaaaatattttgactgaaatt 791
Query: 61 ttggttgcattttaaggcaataaagcccttcaggatgaggctgataatggtaagctgttg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 790 ttggttgcattttaaggcaataaagcccttcaggatgaggctgataatggtaaggtgttg 731
Query: 121 ataatgaaggtaatagctctcttgtattgtttgttgtgtgctgggctttgaacttagggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ataatgaaggtaatagctctcttgtattgtttgttgtgtgctgggctttgaacttagggc 671
Query: 181 ctttgcagtgagccagggcctgacttttgccttgttttcctaaaagctggctaggtccgt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 670 ctttgcagtgagccagggcctgacttttgccttgttttcctaaaagctggctaggtccat 611
Query: 241 gtagcccatttcaacctccacgaggacaaggaaagaggacctgtttaccagtttagtgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gtagcccatttcaacctccacgaggacaaggaaagaggacctgtttaccagtttagtgca 551
Query: 301 cacatgacaggaggctggcccgggataacccacaaatgaatagtattattcctattgcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 cacatgacaggaggctggcccgggataacccacaaatgaatagtattattcctattgcat 491
Query: 361 atccacgtaggctgaagctccaggagggtaactgttgggccaagctgaagagttgagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 atccacgtaggctgaagctccaggagggtaactgttgggccaagctgaagagttgagctt 431
Query: 421 caagtgaaacatcctacggtcccaagtttccatcataattacttctcttaagtgtccaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 caagtgaaacatcctacggtcccaagtttccatcataattacttctcttaagtgtccaac 371
Query: 481 tagatggtgggtgggacacaggcagccaagaagtgcttctgggattttcattctggctat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tagatggtgggtgggacacaggcagccaagaagtgcttctgggattttcattctggctat 311
Query: 541 ggctcagtggctagactcaaggagagggaaagaggaagatgtgcctcccaggccaacagg 600
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 310 ggctcagtggctagactcaaggagagggaaagaggaggatgtgcctcccaggccaacagg 251
Query: 601 gcaagtctggcttcagaatggcacctgtgggtaatgtcccccatgaagga 650
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gcaagtctggcttcagaatggcacctgtgggtaatgtcccccatgaagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no543_o12.g1 MSMg01no543_o12.g1 CHROMAT_FILE:
MSMg01no543_o12.g1 PHD_FILE: MSMg01no543_o12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:24 2005
(527 letters)
>mm_chr5_43847247_43848173
Length = 927
Score = 903 bits (467), Expect = 0.0
Identities = 505/522 (96%), Gaps = 10/522 (1%)
Strand = Plus / Plus
Query: 1 actcccaatagactttaattagcaatagagagaanaccttcttcccagtcctagataaaa 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 actcccaatagactttaattagcaatagagagaaaaccttcttcccagtcctagataaaa 260
Query: 61 ctcttttccctacatccctagctcagcagtcttgacagaagataagaagcagctggcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcttttccctacatccctagctcagcagtcttgacagaagataagaagcagctggcaga 320
Query: 121 gtgtgggagacaaaacagcatttggccagacagctgggactgagtgcattctcactgggg 180
|||||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 321 gtgtgggagacaaaactgcatttggccagacagctgggactgtgtgtattctcactgggg 380
Query: 181 gcacaagagactccaaaaagttacaatatgatttgattttacgtttcatgaccctggaa- 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 gcacaagagactccaaaaagttacaatatgatttgattttacgtttcatgaccctg-aag 439
Query: 240 atatatataaaaataagcctggacacttgtatatatgagaacccaatgacaggattgcac 299
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 440 atatatataaaaataagcctggacacttgtatatatgagaacctaatgacaggattgcac 499
Query: 300 aaatattcccattaacactattaacaagcatgtcagtaagacagtggtttgtaagcaggg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaatattcccattaacactattaacaagcatgtcagtaagacagtggtttgtaagcaggg 559
Query: 360 atcattaaaagtcgaatgtttgaaagaaaggattttgaaatgtgcgctgctgagagaatg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atcattaaaagtcgaatgtttgaaagaaaggattttgaaatgtgcgctgctgagagaatg 619
Query: 420 gatagttttgggacatgaggatattgatttggacaggactcagctcaaacctctgtcctg 479
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 620 gatagttttggggcatgaggatattgatttggacaggactcagctcaaacct-------g 672
Query: 480 gtacagcttgattcattctcgctgattttgggtggttttttt 521
||||||||||||||||||||||||||||||| || |||||||
Sbjct: 673 gtacagcttgattcattctcgctgattttggttg-ttttttt 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
