NNNNNTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTTCTGTCAAAATATCTTTTTTTAATTTTATTTTATTTT
TAATTTATTTTTTTCAATCCATATTCCATTCCCCGCCCCCCCATTCACCC
TCCAACTGCTCCACATTCCACACCTCCTCCCCAACCCACCCTGTCTCCAA
GTGGATGTCCCCACCCCCTCACCCCACCTGACCTCTAAACTCCCTGGGGC
CTCCAGTCTCTTGAGGGTTAGGTATATCATCTCTGAATGAACACAGACCT
GGAAGTGCTCTACTGTGTGTGTGTGTTGGGGGTTCATATCAGCTGGTGTA
TGCTGTCTGTTTGATAGTCCAGTATTTGAGAGCTCTCGGAGGTTCAGAAT
TTTGTGATAAATAAATCTGACTGGTTTATTATAGCTTCAAGAGTTTTGTT
TTACTGGGTTACTGGAATGTGGGACCACCAACCGCAGGGTTTTATGGGTA
AGAAGGTACGGGTGGCTATGAGACAAGTGATCCAGAGCTGGGGAGACTGT
GATCGGTCACTGCTGAGGCTAGTCTAGAGGCAGAGGAGGCAGGAGCTCGC
CGAGGCAGAGAGTTGCAAACAGTAGCACAGAAAGTCTGCCAGTCTTTTTA
AATATTTCCCACAACAGTATCTAATATATGTAACCCTTTTATTTCTGTGG
ATTAAAGGATTATAGAAACTTCAAGTGTCTGTGTAAAATGTCTTAAGAGN
A

NNGGGGACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGATGTTATATTCATG
AAACTTATTGTTTTATAAGGATTGTTTATTCCATTTATTATTTTAATAAT
CAGAATTGTCTGTTTTATTTTAAAGCAAATACAAAAGTAGTACCTAATTC
TGTGGTGAAGTATAATGGCTAATGCATGTACTCACTCAATAATTATCAAA
TAAGGATAATTGGCAGAACATCACCTCAAATATTTGTTATTATTTGTGAT
GAGAGCATTTAAAATCTTCTACTTACCTATACATCACCTTTGTATTTATG
CTTTTTTCTTATTCTTCCTATCTTTCCATAGTTATTTACTGGTTGAGTTA
TAGCTCCCCATGTTTTCTACTCTCTGCCCATTCCCTCTTCTGAGACTCAA
TCATTATCTGATTTCATATTTCTGTGAGATTAAAATTTTAATATATTGTA
ATATTCAATATTAATGAAGTTCTCACATTATTCTCTTTCTGGTCCTGATA
TATCTCATTAAACACACACAATTCATCCACATCCTGTAAAGGCCAAAAAT
TCAGTCATTTTATGTCTAAATAGTGTTTCTCTCTCTGTGTCTCCCTGTCT
TGCTCTGCCTGCCTGCCTGCCTGCCTGTCTGTCTGTCTCTCTGTCTCTCT
GTCTTTCCTTTCCTCCCAGCCCCCCTCTCTCTCTCCTCTGTGTGG

Query= MSMg01no544_l12.g1 MSMg01no544_l12.g1 CHROMAT_FILE:
MSMg01no544_l12.g1 PHD_FILE: MSMg01no544_l12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:28 2005
         (632 letters)



>mm_chr5_68667405_68668436
          Length = 1032

 Score = 1207 bits (624), Expect = 0.0
 Identities = 630/632 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tggatgttatattcatgaaacttattgttttataaggattgtttattccatttattattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggatgttatattcatgaaacttattgttttataaggattgtttattccatttattattt 260

                                                                       
Query: 61  taataatcagaattgtctgttttattttaaagcaaatacaaaagtagtacctaattctgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taataatcagaattgtctgttttattttaaagcaaatacaaaagtagtacctaattctgt 320

                                                                       
Query: 121 ggtgaagtataatggctaatgcatgtactcactcaataattatcaaataaggataattgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtgaagtataatggctaatgcatgtactcactcaataattatcaaataaggataattgg 380

                                                                       
Query: 181 cagaacatcacctcaaatatttgttattatttgtgatgagagcatttaaaatcttctact 240
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 cagaacatcacctcaaatatttgttattatttgtgatgagaacatttaaaatcttctact 440

                                                                       
Query: 241 tacctatacatcacctttgtatttatgcttttttcttattcttcctatctttccatagtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacctatacatcacctttgtatttatgcttttttcttattcttcctatctttccatagtt 500

                                                                       
Query: 301 atttactggttgagttatagctccccatgttttctactctctgcccattccctcttctga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttactggttgagttatagctccccatgttttctactctctgcccattccctcttctga 560

                                                                       
Query: 361 gactcaatcattatctgatttcatatttctgtgagattaaaattttaatatattgtaata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gactcaatcattatctgatttcatatttctgtgagattaaaattttaatatattgtaata 620

                                                                       
Query: 421 ttcaatattaatgaagttctcacattattctctttctggtcctgatatatctcattaaac 480
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 ttcaatattaatgaagttctcacattattctctttctggtcctgatttatctcattaaac 680

                                                                       
Query: 481 acacacaattcatccacatcctgtaaaggccaaaaattcagtcattttatgtctaaatag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acacacaattcatccacatcctgtaaaggccaaaaattcagtcattttatgtctaaatag 740

                                                                       
Query: 541 tgtttctctctctgtgtctccctgtcttgctctgcctgcctgcctgcctgcctgtctgtc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtttctctctctgtgtctccctgtcttgctctgcctgcctgcctgcctgcctgtctgtc 800

                                           
Query: 601 tgtctctctgtctctctgtctttcctttcctc 632
           ||||||||||||||||||||||||||||||||
Sbjct: 801 tgtctctctgtctctctgtctttcctttcctc 832


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space:   635684
Effective search space used:   635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)