Query= MSMg01no544_m03.b1 MSMg01no544_m03.b1 CHROMAT_FILE:
MSMg01no544_m03.b1 PHD_FILE: MSMg01no544_m03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:31 2005
(461 letters)
>mm_chr5_82310844_82311704
Length = 861
Score = 814 bits (421), Expect = 0.0
Identities = 451/461 (97%)
Strand = Plus / Minus
Query: 1 taagtccaatgacagagtggttggtcacccctataacaggtgtgcctgtagtgttcaagt 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 661 taagtccaatgacagagtggttggtcacccctataacagttgtgcctgtagtgttcaaat 602
Query: 61 gattgtagtgtttttcttacctgttatatagatataatctctaacagaaacatgaatgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gattgtagtgtttttcttacctgttatatagatataatctctaacagaaacatgaatgtc 542
Query: 121 aaaggtactttggcactatgaatttttccaatgtagcttgaaatgagaaattgccatttt 180
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 541 aaaggtactttggcactatggatttttccaatgtagcttgaaatgagaaatttccatttt 482
Query: 181 gttgatgttgattgtgattgtgttttagagcaaaaaaattgtattttacctttttaagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 481 gttgatgttgattgtgattgtgttttagagcaaaaaaattgtattttacctatttaagtt 422
Query: 241 aaaataaattcttgaaaatagtcaaagttagctattgagttaccattttataaacttctg 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaataaattcttgaaaaaagtcaaagttagctattgagttaccattttataaacttctg 362
Query: 301 tcggtgtgtagatatgtgatttgaagaatttcaatctaaaaaattatattttccctccca 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctgtgtgtagatatgtgatttgaagaatttcaatctaaaaaattatattttccctccca 302
Query: 361 agagcagttaactctgtcttctaacttgaggttgttttataagtttttaccttggagaat 420
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agagtggttaactctgtcttctaacttgaggttgttttataagtttttaccttggagaat 242
Query: 421 gattgaatattaaaatttttatgaatattgatactttgttg 461
||||||| |||||||||||||||||||||||||||||||||
Sbjct: 241 gattgaacattaaaatttttatgaatattgatactttgttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_m03.g1 MSMg01no544_m03.g1 CHROMAT_FILE:
MSMg01no544_m03.g1 PHD_FILE: MSMg01no544_m03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:32 2005
(605 letters)
>mm_chr5_82159027_82160033
Length = 1007
Score = 1069 bits (553), Expect = 0.0
Identities = 593/607 (97%), Gaps = 2/607 (0%)
Strand = Plus / Plus
Query: 1 attgaaccaaatttctgcctaggatcattttgttcattaaagattaaagtattataaagg 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgaaccaaatttctgcctagggtcattttgttcattaaagattaaagtattataaagg 260
Query: 61 agctattattttgataatggctgacatgaatgtgtcgtatttccatttggacttaattaa 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 agctattattttgataatggctgacatgaatgtgtcatatttccatttggacttaattaa 320
Query: 121 gatatcttcttaaataaaattaaaatgaatgaatttaattagttaattttgttggtggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatatcttcttaaataaaattaaaatgaatgaatttaattagttaattttgttggtggtt 380
Query: 181 ctgagattaaacttggcttgctgcatacgaagcaaccaccctatcactgagctatatccc 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgagattgaacttggcttgctgcatacgaagcaaccaccctatcactgagctatatccc 440
Query: 241 tagccagggcattggattttgactacagttttaggctttctgcattctgtaacttggtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagccagggcattggattttgactacagttttaggctttctgcattctgtaacttggtat 500
Query: 301 gtactgttttctatcttcatggttcctgtaattgttcactgctgcttttactttattcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtactgttttctatcttcatggttcctgtaattgttcactgctgcttttactttattcca 560
Query: 361 gatatatata--cattttatttattccatctcattttccctgacttgctaactatgtaac 418
||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 561 tatatatatatacattttatttattccatctcattttctctaacttgctaactatgtaac 620
Query: 419 tttattttctttattggggaatgttgcagcaaaagaaaattttggaagatatcagaaaaa 478
|||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 621 tttattttctttattgggtaatgttgcagcaaaacaaaatttcggaagatatcagaaaaa 680
Query: 479 cttcagttaagagattcttgtaagggctggagaggtggctgagaggtttagagcactgac 538
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 681 cttcagttaagagattcttgtaagggatggagaggtggctgagaggtttagagcactgac 740
Query: 539 tgttcttccagaggacccagattcagttcccagtgtccacgtggcagctcccaactgtct 598
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 741 tgttcttccagaggacccagattcagttcccagtgtccacatggcagctcacaactgtct 800
Query: 599 gtagctc 605
|||||||
Sbjct: 801 gtagctc 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1007
Length adjustment: 10
Effective length of query: 595
Effective length of database: 997
Effective search space: 593215
Effective search space used: 593215
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
