GGTCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTTGTGTAGCTCTGTACAACATTTTTTAATGGAGTTATTTG
AATTTCTGGAATCCAGCTTCTTGAGCTCTTTGTATGTATTGGATATTAGT
CCCCTATCAGATTTAGGATTGGTAAACAATTCTTTCCCAATCTGTTGGTG
GCCTTTTTGTCTTGTTGACAGTATCTTTTGTCGAACAGAAGCTTTGCAAT
TTTATGAAGTCCCATTTGTCAATTCTTGATCTTACATCACAGGCCATTGC
TGTTCTGTTTAGGAATTTTTCCCCTGTACCCATATCTTCGAGGCTTTCCC
TCAATTTCTCCTCTATAAATTTTAGTGTCTCTGGTTTTATGTGGAGTTCT
TTGATCCACTTAGACTTGAGCTTTTTACAAGGAGATAAGAATGAATCAAT
TCGCATTCTTCTACATGATAACTGCCAGTGTGCCAGCATCATTTGTTGAA
AATGCTGTATTTTTTCCACTGGATGGTTTTACCTCCATTGTCAAAGATCA
AGTAATCATAGGAGTGTAGGTTCATTTCTAGGTCTTCAATTCTATTCCAT
TGGTCTACCTGTCTGTCAACTGTACCAGTACCATGCAGTTTTTATCACAA
TAAAACTCTGTAGTACAGCTTGAAGTCAGTCATGGTGATTCCCCCAGAGG
TTCTTTTATTGTTTGAGAATAACTTTTGCTATNCTAGGTTTCCTATTTTT
CC

NCGCAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXACTCTGTGGATCAGGCTGGCCG
TGAACTCAGAAATCCACCTGCCTCTGCCTTTCAAGTGCTGGGATTAAAGG
CGTGTGCCACCACTGCCCAGCAATTCTGCCTTCTTTTTAATGAAGACATG
GGAGAAATGGGGAAGATGGAGGCATGTGGTCCCTATCTTCTGCTTCTCTA
TTAGTGTTAATGGTGAAGCATGGGATGAATTCTTCCTGTTTTAGCCACAG
TAGAACCTGTTAAAGTTAAGAAGTGGTAGATTCCTCCCACTGAACATAAT
TCATCTGCACCAGGCTGTAAGACAATGTCACCTAGTTAAGAAAAAGAAAG
TTTTACACACTGGATGTTGACAGAAGAGATGGGATGGAGTTCTGTTGACG
AGGATATACCAGAAATTTTTGCTGGGGTGAAACCTCTTTTTGATTTGGGA
GCATTGCCCCCTTAATCACGTCAAAAACGCGAATTTTCCTAGTGATCACT
GCCTTAGCTTCTTTTCATGTTACTGAGATACAACATCCAGACAAATGTAA
CTTAAGGGAGAAGGGGCTTATTTTTGGCTCAAAGTGGGAAGTCGACAGTG
GCAGGAGTTTGAGGGAGCTGGTGTCATATCATATCCAGTCAGGAAGAGAG
AACAATGCATGTACTCAGCTCCCTCTTCTCACAGTCCAGGATCTCAGCCA
GGG

Query= MSMg01no544_n11.g1 MSMg01no544_n11.g1 CHROMAT_FILE:
MSMg01no544_n11.g1 PHD_FILE: MSMg01no544_n11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:38 2005
         (554 letters)



>mm_chr5_28000783_28001736
          Length = 954

 Score = 1064 bits (550), Expect = 0.0
 Identities = 553/554 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   actctgtggatcaggctggccgtgaactcagaaatccacctgcctctgcctttcaagtgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 actctgtggatcaggctggccgtgaactcagaaatccacctgcctctgcctttcaagtgc 705

                                                                       
Query: 61  tgggattaaaggcgtgtgccaccactgcccagcaattctgccttctttttaatgaagaca 120
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 704 tgggattaaaggcgtgtgccaccactgtccagcaattctgccttctttttaatgaagaca 645

                                                                       
Query: 121 tgggagaaatggggaagatggaggcatgtggtccctatcttctgcttctctattagtgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tgggagaaatggggaagatggaggcatgtggtccctatcttctgcttctctattagtgtt 585

                                                                       
Query: 181 aatggtgaagcatgggatgaattcttcctgttttagccacagtagaacctgttaaagtta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 aatggtgaagcatgggatgaattcttcctgttttagccacagtagaacctgttaaagtta 525

                                                                       
Query: 241 agaagtggtagattcctcccactgaacataattcatctgcaccaggctgtaagacaatgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 agaagtggtagattcctcccactgaacataattcatctgcaccaggctgtaagacaatgt 465

                                                                       
Query: 301 cacctagttaagaaaaagaaagttttacacactggatgttgacagaagagatgggatgga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cacctagttaagaaaaagaaagttttacacactggatgttgacagaagagatgggatgga 405

                                                                       
Query: 361 gttctgttgacgaggatataccagaaatttttgctggggtgaaacctctttttgatttgg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gttctgttgacgaggatataccagaaatttttgctggggtgaaacctctttttgatttgg 345

                                                                       
Query: 421 gagcattgcccccttaatcacgtcaaaaacgcgaattttcctagtgatcactgccttagc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gagcattgcccccttaatcacgtcaaaaacgcgaattttcctagtgatcactgccttagc 285

                                                                       
Query: 481 ttcttttcatgttactgagatacaacatccagacaaatgtaacttaagggagaaggggct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttcttttcatgttactgagatacaacatccagacaaatgtaacttaagggagaaggggct 225

                         
Query: 541 tatttttggctcaa 554
           ||||||||||||||
Sbjct: 224 tatttttggctcaa 211


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space:   513536
Effective search space used:   513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)