TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
AAGGCGCATACCTAAACATGATAAAAGCAATCTACAGCAAACAAGTAGCC
AACAGTAAAGTAAATGGTGAGAAGCTGGAAGCAATCTCACTAAAATCAGG
GACTAGACAAGACTGCCCACTTTCTCCCTACCTATTCAACATTGTACTTG
AAGTCCTATCCAGAGCAATTTGACAACAAAAGGAGATCAAGGGGATACAA
ATTGGAAAGGAAGAAGTCAAAAATATCACTTTTTGCAGATGATATGATAA
TATATATAAGTGACCCTAAAAATTCCATCAGAGAACTCCTAAACATGATA
AACATCTTTGGTGAAGTGGCTGGATATAAAATTTACTCAAACAAGTCAAT
AGCCTTTCTCTACACAAAGAATAAACAGGTTGAGAAAGAAATTAGGGAAA
CAGCACGCTTCTCAATAGTCACAAATAATATGAAATACCTTGGCGTGACT
CTAACTAAGGAAGTGAAATATCTGTATGAAAAGAACATGAAGTCTCTGAA
GAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCAT
GGACTGGCAGGATCAATATTGTAAAAATGGCTATCTTGTCAAAAGCAATC
TAAAGATTCAATACAATCCCCATCAAAATTCCAACTCAATCCTTCAAGGA
ATTAGAAAGAGCAATCTGCAAATTCATCTGG

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXATTGTTTATATAACAGGTCGCTCACAAATTT
AAATTATTTAACAGCTATCTTTCAAGGGTGAACATTCACATTCAACAACT
GTAAACCAAACTGTGAATTATTGTACTGTACTTGACAATACCCCTGTAAC
AGAAATTAAGTTAAAGTGTTAGAATAATAAATTTGATCAAAGTTATATAA
GAAGTATTTCTGCTTTTTCACAGGCGGCAGAAAATTTACTGTTACTTTTT
ATTTTAATGAAATAATAATTAATGAGAAAAGAGGTTATAATTTGAAGGAG
AGCAAGAAATACTATATGGGAGGCTTTGGAGGGAGGAGTTTCAAGCAAGC
AGTGGAACAATTATATTATAATTTCAAAAATAAAAAATAATAAAAATGCA
TGAGTTCATTTTCTTTAATGAACATCTTCACATGAAATATTACAAAAAAC
TAGGATGTCAGTAAATCTTTTACAAATATATGGTGCCATGAACTAAATTC
CCCAGTAATAAGATCCAGTTAGCAAAAATATTCAACTTTGTGTAACTCCT
TCAGAAACATCTGCCTATGGCTTCTTGATAGAGATCACTGTGACATCGGT
CATAAATCTGAGGGATGCTCTTTCATACTTAAAGTCATATGCTTATGTGA
TTCCAAGTAAATTTTTTCACAAATATTC

Query= MSMg01no546_a10.g1 MSMg01no546_a10.g1 CHROMAT_FILE:
MSMg01no546_a10.g1 PHD_FILE: MSMg01no546_a10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:11 2005
         (659 letters)



>mm_chr5_82615768_82616826
          Length = 1059

 Score =  920 bits (476), Expect = 0.0
 Identities = 488/492 (99%)
 Strand = Plus / Minus

                                                                        
Query: 168  tcaaagttatataagaagtatttctgctttttcacaggcggcagaaaatttactgttact 227
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1059 tcaaagttatataagaagtatttctgctttttcacaggtggcagaaaatttactgttact 1000

                                                                        
Query: 228  ttttattttaatgaaataataattaatgagaaaagaggttataatttgaaggagagcaag 287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999  ttttattttaatgaaataataattaatgagaaaagaggttataatttgaaggagagcaag 940

                                                                        
Query: 288  aaatactatatgggaggctttggagggaggagtttcaagcaagcagtggaacaattatat 347
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 939  aaatactatatgggaggctttggagggaggagtgtcaagcaagcagtggaacaattatat 880

                                                                        
Query: 348  tataatttcaaaaataaaaaataataaaaatgcatgagttcattttctttaatgaacatc 407
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879  tataattccaaaaataaaaaataataaaaatgcatgagttcattttctttaatgaacatc 820

                                                                        
Query: 408  ttcacatgaaatattacaaaaaactaggatgtcagtaaatcttttacaaatatatggtgc 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819  ttcacatgaaatattacaaaaaactaggatgtcagtaaatcttttacaaatatatggtgc 760

                                                                        
Query: 468  catgaactaaattccccagtaataagatccagttagcaaaaatattcaactttgtgtaac 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759  catgaactaaattccccagtaataagatccagttagcaaaaatattcaactttgtgtaac 700

                                                                        
Query: 528  tccttcagaaacatctgcctatggcttcttgatagagatcactgtgacatcggtcataaa 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699  tccttcagaaacatctgcctatggcttcttgatagagatcactgtgacatcggtcataaa 640

                                                                        
Query: 588  tctgagggatgctctttcatacttaaagtcatatgcttatgtgattccaagtaaattttt 647
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639  tctgaggaatgctctttcatacttaaagtcatatgcttatgtgattccaagtaaattttt 580

                        
Query: 648  tcacaaatattc 659
            ||||||||||||
Sbjct: 579  tcacaaatattc 568


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space:   680801
Effective search space used:   680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)