NNNCCACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCATATTATATCTATGAACATGACTAAGATCAAAAATTCAG
CTCAGGCTGTCAAGAATGTGGAGCAAAACAAGCCTTTCTCCCTTGCTGGT
GGAAGTGCAGAGTTGTATAACCAGTTTGGAAATCAATTTGGTGGTTTCTC
AGAAAACTGTCTCATGATATAGTTCTACCTCAAGACCCAGTTATACTATT
CCTGGGCTTATCCCTAAAAGTTGTTCCACCATGCCACAAAGACACTTGTT
CAGCTGTGTTCATAGTAGCAGCTTTATTTGTAATAGCCAGAAATTGGAAA
CAACCTAGATGTTTGTCAATGGGAGAATGAATAAATATGCCACATTTACA
TAATGGAGTATTACTCATCTATTAAAAACAAAGACATCATGAACTTTTCT
GGAAAATGGATGAAACTAGAAAAGATCATACTGAGTGAGGTAACCCAGAA
AGACAAACATGGTATGTACTCACTTAAAAGTTGATATTAGATATAAAGTA
CAGTATAAACATACTACAATCCACAGACCCAAAGAAGCTAAGTAACAAGG
AGATCACATGGGAGGATGTTTGAATCTTAATGAGAAGGATAAATAAAGTA
AACATCTGGCATGGATGAAGGGATTGAGAGTACTATGTGGGAGAGAAGAT
GGGGAGAGAGAA

NNGGCGCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACATGCAGAAATGAATGT
CTTGATATAATATGACATTTCATTGTGCTCTATATAATTCCTAAAAAGTA
TTAGATATACATAGGTATACATTGGGAAACATGTTTTTTTCTGCATAGTA
ATATACTCACATTTATCAGTATATAATGCTTTAACCTATATATTCCATGA
TAGCAAGTAATGTCTTTTAATTTAGTCAATATACTAGCAAAAATAAATAG
ATATTATTGCCAATCTAAAGCAAGTACTTTGGTTTATCTAACTTTAAAAG
AAACAGAGTAACTTTTCCATGTTTGATCAGACACATATCAACATACATGC
AAACATACTTGAACAGTTACTCATCACAAATACAGAAACACCATCAAACA
AATGGTTAAAATAAATTATAATTAGAATAACAAATGGAATTAAAATAAAA
TTCAAATTATTTTGGCAATCTGTTCTAATCTTCTATATCCTTTTCATTCT
CTGACTAATTTTATCTTCCCCTGGAACTTGTCTGTAATATAGTACCTGAT
AAACTGCCTCCAAACTCCATGACTGTACCACAATGAATCCATTTCATTCC
ATTGCCTCTCAACTCACTGACTCAACCAACTGATTAACTCAAAATCAGAG
ATTGGCTTGGCT

Query= MSMg01no548_f18.g1 MSMg01no548_f18.g1 CHROMAT_FILE:
MSMg01no548_f18.g1 PHD_FILE: MSMg01no548_f18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:15 2005
         (608 letters)



>mm_chr5_7004371_7005378
          Length = 1008

 Score = 1147 bits (593), Expect = 0.0
 Identities = 605/609 (99%), Gaps = 1/609 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tacatgcagaaatgaatgtcttgatataatatgacatttcattgtgctctatataattcc 60
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 620 tacatgcagaaatgaatgtcttgatataatatgacatttcattatgctctatataattcc 561

                                                                       
Query: 61  taaaaagtattagatatacataggtatacattgggaaacatgtttttttctgcatagtaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 560 taaaaagtattagatatacataggtatacattgggaaacatgtttttttctgcataggaa 501

                                                                       
Query: 121 tatactcacatttatcagtatataatgctttaacctatatattccatgatagcaagtaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tatactcacatttatcagtatataatgctttaacctatatattccatgatagcaagtaat 441

                                                                       
Query: 181 gtcttttaatttagtcaatatactagcaaaaataaatagatattattgccaatctaaagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtcttttaatttagtcaatatactagcaaaaataaatagatattattgccaatctaaagc 381

                                                                       
Query: 241 aagtactttggtttatctaactttaaaagaaacagagtaacttttccatgtttgatcaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aagtactttggtttatctaactttaaaagaaacagagtaacttttccatgtttgatcaga 321

                                                                       
Query: 301 cacatatcaacatacatgcaaacatacttgaacagttactcatcacaaatacagaaacac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cacatatcaacatacatgcaaacatacttgaacagttactcatcacaaatacagaaacac 261

                                                                       
Query: 361 catcaaacaaatggttaaaataaattataattagaataacaaatggaattaaaataaaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 catcaaacaaatggttaaaataaattataattagaataacaaatggaattaaaataaaat 201

                                                                       
Query: 421 tcaaattattttggcaatctgttctaatcttctatatccttttcattctctgactaattt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tcaaattattttggcaatctgttctaatcttctatatccttttcattctctgactaattt 141

                                                                       
Query: 481 tatcttcccctggaacttgtctgtaatatagtacctgataaactgcctccaaactccatg 540
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 140 tatcttcccctggaacttgtctgtaatatagtccctgataaactgcctccaaactccatg 81

                                                                       
Query: 541 actgtaccacaatgaatccatttcattccattgcctctcaactcactgactcaacc-aac 599
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 80  actgtaccacaatgaatccatttcattccattgcctctcaactcactgactcaaccaaac 21

                    
Query: 600 tgattaact 608
           |||||||||
Sbjct: 20  tgattaact 12


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space:   596804
Effective search space used:   596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)