BAC Information

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BAC

Clone NameB6Ng01-003N15
Chromosome6 (Build37)
Map Location 18,835,452 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003N15.bB6Ng01-003N15.g
ACCDH841435DH841436
length9561,231
definitionDH841435|Mus musculus domesticus DNA, BAC clone: B6Ng01-003N15, 5' end.DH841436|Mus musculus domesticus DNA, BAC clone: B6Ng01-003N15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgatggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagttttagtgtctctggttttaagtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagatg
aatttacaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgagtctgtagattgcttttggcaagatagccattt
ttacaatgttgatcttgccaatccatgagcatgggaggtccttccatctt
ctgagatcttctttaatttctttcttcagagatttgaatttttttctaca
gatctttcacttccttagttagagtcacggcgagatatttatattatttg
tgacta

gaattccacataaaaccagagagagtgaaacttatagaggaggaagtggt
caaaagcctgaaagatatgggcatagggaaaaaatttctgaatagaacag
caatggctagtgctctaagatcaagaaacgacaaatgggacctcatgaaa
ctgcaaagcttctgtaaggcaaaagacactgtcaataagacaaaaaggcc
accaacagattgggatgggtctttcctaatcctaaatcagacaggggact
aatatccaatatatatataaagaactcaagaaagtggactcagaaaatca
aataatcccagtaaaaatggggctcagagttaaacaaagaattctcacct
gaggaataccgaatagctgcgaagcacctgaaaaaatctttagcatcctt
aatcatcagggaaatgcaaatcaaaacaatcctgagattccacctcacac
cagtcagaaaggctaagatcaaaaattcaggtgacagtagatgctggcaa
ggatgttgagaaagaggaacactcctccattgttggtgggattgcaagct
tgtacaaccactctggaaatcaatctgatggtacctcagaaaattggaca
tactatcagaggatcccgcattacctctcctgggcatatatccagaagat
gtttcaactggtaagaaggacacatgctccactatgttcatagaagcctt
atttattatagccataatctggaaagagcccagatgtccctcaacagagg
aattgatacaaaaaatgcggtacatttacacaatggagtactactcagct
attaaaaagaatgaatttatgaaattcctaggcaagtggatggacctgga
gggcattatcctgagtgaggtaacccaatctcaaaagaactcacattata
tgtactcactgatagtggatatagcccagaaacttagaatatccaagata
tagatacatttgcaaacacatgaaactcaagagacgagacatagtgtgga
cactttgccttctagatggggaacaaaacatcatggagaagttacacaga
caagagtttggagctgaaaggaaggatggacatctagggattgcaacagg
atctatccataatcagcctccaaatgctgaaccttgcctcactagcaaga
ttgctgaaggactgatacctgttcttgagcatgccgggtcctggcacaac
ggaagtggagtctcacgtgatcgagcatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-003N15.b_49_566 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  GTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      |||||||||||||||||||||||||||||||| |||||||||||||||| 
seq2  AGGTCAAATCTAAGTGGATCAAGGAACTTCACTTAAAACCAGAGACACTA  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518


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