BAC Information

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BAC

Clone NameB6Ng01-003O17
Chromosome6 (Build37)
Map Location 87,699,807 - 87,700,922
singlet/doubletsinglet
Overlap genenone
Upstream geneAnxa4, 2610306M01Rik, Aak1, LOC100043555, Nfu1, Gfpt1, D6Ertd527e, Antxr1, Gkn1, Gkn2, 1190003M12Rik, Bmp10, Arhgap25, Prokr1, 2010301N04Rik, 1810020O05Rik, AB041550
Downstream geneLOC100043118, EG545864, Gp9, Rab43, Isy1, Cnbp, Copg, 8430410A17Rik, LOC665416, H1fx, EG434064, LOC100043131, Rab7, Rpn1, Gata2, Dnajb8, Eefsec, Ruvbl1, Sec61a1, 4933428M03Rik, Mgll
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003O17.g
ACCDH841481
length1,114
definitionDH841481|Mus musculus domesticus DNA, BAC clone: B6Ng01-003O17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgagtgtcaggtcagtcagcacaaactgctcaggaaagtatggg
ctcgcataacttgagtccatagatttggggccacccccaataactactgg
cctattcccccaaccctgagatcaatcactgtcagcagacatacctccct
ggctccagcccatatcttggcctccaagcccagagcaggaagatcagccc
ccatctgagttcattttggctatatccttcactgacttgcatggtgtccc
agctcttccagaacctccactgagactggagagagctgtctctggttgac
acagcctgacagatacccagagccggaatgcaaaagggtcagggtctctt
ggagtctctgatctgcaaatagggacaaggactttggctgggcaatagga
cagggcagctgccatcacctacgccagtcaggatggtgttcaccaaagct
cagcagttagggggaccacaggccacatattggacaccttttctcccaca
accccccaaaactgagaactgaaagtcctgagtgacatataccagcaccc
cacaaagctctatccagttccccaatctaagtcattacatgtcctgaagt
agatctgatgctgggccatgacaccagagatgcctcctcatgtgccacct
aaggagacagggactgtatctcaggggctcccgtgcagttccccaggggc
tgagccagtgtcatggtgtcaccagtgcctcacttcacacatgttcccaa
ggagggctgtttggtcctcatgccgggtcaccagtccctggatgtcatat
tttccccagcagaggatgagcagctgttccgctccgtggaaggccaggtc
tgcctctgaggaggaagaggaagaaaggtggcaggaaaagccaaggcgcc
cacagggctcatggtgaggtacccttgtgcaactctcagctgtgtgagta
ggtaagtgctggatagcctcaggctgcaaaaacacagagcagcacaaagt
agattcttcttgcagagcttcacacggcttcattaggggaggctaccagt
ctagtgcacagtcccactttagcctcctgacagcccttccctggtaaaca
tagctcagaggtgg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_87699807_87700922
seq2: B6Ng01-003O17.g_69_1182

seq1  GAATTCTGAGTGTCAGGTCAGTCAGCACAAACTGCTCAGGAAAGTATGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGTGTCAGGTCAGTCAGCACAAACTGCTCAGGAAAGTATGGG  50

seq1  CTCGCATAACTTGAGTCCATAGATTTGGGGCCACCCCCAATAACTACTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCATAACTTGAGTCCATAGATTTGGGGCCACCCCCAATAACTACTGG  100

seq1  CCTATTCCCCCAACCCTGAGATCAATCACTGTCAGCAGACATACCTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCCCCCAACCCTGAGATCAATCACTGTCAGCAGACATACCTCCCT  150

seq1  GGCTCCAGCCCATATCTTGGCCTCCAAGCCCAGAGCAGGAAGATCAGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCAGCCCATATCTTGGCCTCCAAGCCCAGAGCAGGAAGATCAGCCC  200

seq1  CCATCTGAGTTCATTTTGGCTATATCCTTCACTGACTTGCATGGTGTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGAGTTCATTTTGGCTATATCCTTCACTGACTTGCATGGTGTCCC  250

seq1  AGCTCTTCCAGAACCTCCACTGAGACTGGAGAGAGCTGTCTCTGGTTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTCCAGAACCTCCACTGAGACTGGAGAGAGCTGTCTCTGGTTGAC  300

seq1  ACAGCCTGACAGATACCCAGAGCCGGAATGCAAAAGGGTCAGGGTCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTGACAGATACCCAGAGCCGGAATGCAAAAGGGTCAGGGTCTCTT  350

seq1  GGAGTCTCTGATCTGCAAATAGGGACAAGGACTTTGGCTGGGCAATAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTCTGATCTGCAAATAGGGACAAGGACTTTGGCTGGGCAATAGGA  400

seq1  CAGGGCAGCTGCCATCACCTACGCCAGTCAGGATGGTGTTCACCAAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCAGCTGCCATCACCTACGCCAGTCAGGATGGTGTTCACCAAAGCT  450

seq1  CAGCAGTTAGGGGGACCACAGGCCACATATTGGACACCTTTTCTCCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTTAGGGGGACCACAGGCCACATATTGGACACCTTTTCTCCCACA  500

seq1  ACCCCCCAAAACTGAGAACTGAAAGTCCTGAGTGACATATACCAGCACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCCAAAACTGAGAACTGAAAGTCCTGAGTGACATATACCAGCACCC  550

seq1  CACAAAGCTCTATCCAGTTCCCCAATCTAAGTCATTACATGTCCTGAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGCTCTATCCAGTTCCCCAATCTAAGTCATTACATGTCCTGAAGT  600

seq1  AGATCTGATGCTGGGCCATGACACCAGAGATGCCTCCTCATGTGCCACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGATGCTGGGCCATGACACCAGAGATGCCTCCTCATGTGCCACCT  650

seq1  AAGGAGACAGGGACTGTATCTCAGGGGCTCCCGTGCAGTTCCCCAGGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGACAGGGACTGTATCTCAGGGGCTCCCGTGCAGTTCCCCAGGGGC  700

seq1  TGAGCCAGTGTCATGGTGTCACCAGTGCCTCACTTCACACATGTTCCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCAGTGTCATGGTGTCACCAGTGCCTCACTTCACACATGTTCCCAA  750

seq1  GGAGGGCTGTTTGGTCCTCATGCCGGGTCACCAGTCCCTGGATGTCATA-  799
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGAGGGCTGTTTGGTCCTCATGCCGGGTCACCAGTCCCTGGATGTCATAT  800

seq1  TTTCCCCAGCAGAGGATGAGCAGCTGTTCCGCTCCGTGGAAGGCCAGG-C  848
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTCCCCAGCAGAGGATGAGCAGCTGTTCCGCTCCGTGGAAGGCCAGGTC  850

seq1  CGCCTCTGAGGAGGAAGAGGAAGAAAGGTGGCAGGAAAAGCCAGGGCGCC  898
       |||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGCCTCTGAGGAGGAAGAGGAAGAAAGGTGGCAGGAAAAGCCAAGGCGCC  900

seq1  CACA-GGCCCATGGTGAGGTACCCCTGGTGCAACCCTCAGGCTGTGTGAG  947
      |||| ||| |||||||||||| |||| ||||||| |||| ||||||||||
seq2  CACAGGGCTCATGGTGAGGTA-CCCTTGTGCAACTCTCA-GCTGTGTGAG  948

seq1  TAGGTAAGTGCCTGGATAGCCCCAGGCTGCCAAAAAGCACAGAGCAGCAC  997
      |||||||||| |||||||||| ||||||||  |||| |||||||||||||
seq2  TAGGTAAGTG-CTGGATAGCCTCAGGCTGC--AAAAACACAGAGCAGCAC  995

seq1  AAAAGTAGATTCTCCTTGCAGAGCCTTCACACGGCTTCATTAGGGGAAGC  1047
       |||||||||||| ||||||||| ||||||||||||||||||||||| ||
seq2  -AAAGTAGATTCTTCTTGCAGAG-CTTCACACGGCTTCATTAGGGGAGGC  1043

seq1  CAACAGTTCTAGTGCACAGCCACAC-TTAGCC-CCTGACAGCCCTT-CCT  1094
       | ||| |||||||||||| | ||| |||||| ||||||||||||| |||
seq2  TACCAG-TCTAGTGCACAGTCCCACTTTAGCCTCCTGACAGCCCTTCCCT  1092

seq1  GGTAGACATAGCTCAGAGGTGG  1116
      |||| |||||||||||||||||
seq2  GGTAAACATAGCTCAGAGGTGG  1114